Structure of PDB 8gme Chain A

Receptor sequence
>8gmeA (length=267) Species: 10665 (Tequatrovirus T4) [Search protein sequence]
KRKSTAELAAQMAKLNGNKGFSSEDKGEWKLKLDNAGNGQAVIRFLPSKN
DEQAPFAILVNHGFKKNGKWYIETCSSTHGDYDSCPVCQYISKNDLYNTD
NKEYSLVKRKTSYWANILVVKDPAAPENEGKVFKYRFGKKIWDKINAMIA
VDVEMGETPVDVTCPWEGANFVLKVKQVSGFSNYDESKFLNQSAIPNIDD
ESFQKELFEQMVDLSEMTSKDKFKSFEELNTKFGQVMGTAVMGGAAATAA
KKADKVADDLDAFNVDD
3D structure
PDB8gme Crystal structure of the gp32-Dda-dT17 complex
ChainA
Resolution4.98 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna A G22 F23 K67 N69 G70 K71 I74 R138 G20 F21 K65 N67 G68 K69 I72 R136
BS02 ZN A H64 C77 C87 C90 H62 C75 C85 C88
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003697 single-stranded DNA binding
GO:0046872 metal ion binding
Biological Process
GO:0006260 DNA replication
GO:0006281 DNA repair
GO:0006310 DNA recombination
GO:0039686 bidirectional double-stranded viral DNA replication
GO:0039693 viral DNA genome replication

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Molecular Function
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Biological Process
External links
PDB RCSB:8gme, PDBe:8gme, PDBj:8gme
PDBsum8gme
PubMed
UniProtP03695|SSB_BPT4 Single-stranded DNA-binding protein (Gene Name=32)

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