Structure of PDB 8gak Chain A

Receptor sequence
>8gakA (length=128) Species: 562 (Escherichia coli) [Search protein sequence]
VTGDTDQPIHIESDQQSLDMQGNVVTFTGNVIVTQGTIKINADKVVVTRP
GGEQGKEVIDGYGKPATFYQMQDNGKPVEGHASQMHYELAKDFVVLTGNA
YLQQVDSNIKGDKITYLVKEQKMQAFSD
3D structure
PDB8gak Discovery, characterization, and redesign of potent antimicrobial thanatin orthologs from Chinavia ubica and Murgantia histrionica targeting E. coli LptA.
ChainA
Resolution1.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A Q34 P35 I36 H37 I38 E39 S40 D41 Q43 F54 N57 R76 E84 D119 Q7 P8 I9 H10 I11 E12 S13 D14 Q16 F27 N30 R49 E57 D92
Gene Ontology
Molecular Function
GO:0001530 lipopolysaccharide binding
Biological Process
GO:0015920 lipopolysaccharide transport
Cellular Component
GO:0042597 periplasmic space

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8gak, PDBe:8gak, PDBj:8gak
PDBsum8gak
PubMed37416832
UniProtP0ADV1|LPTA_ECOLI Lipopolysaccharide export system protein LptA (Gene Name=lptA)

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