Structure of PDB 8g8g Chain A

Receptor sequence
>8g8gA (length=111) Species: 8355 (Xenopus laevis) [Search protein sequence]
AARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVRE
IAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKD
IQLARRIRGER
3D structure
PDB8g8g Histone modifications regulate pioneer transcription factor cooperativity.
ChainA
Resolution3.2 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna A Y41 R42 T45 R72 R83 F84 Q85 R116 V117 T118 Y18 R19 T22 R49 R60 F61 Q62 R93 V94 T95
BS02 dna A R26 R40 Y41 P43 G44 V46 R49 R63 K64 L65 P66 R69 R83 R3 R17 Y18 P20 G21 V23 R26 R40 K41 L42 P43 R46 R60
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005694 chromosome

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:8g8g, PDBe:8g8g, PDBj:8g8g
PDBsum8g8g
PubMed37225990
UniProtP84233|H32_XENLA Histone H3.2

[Back to BioLiP]