Structure of PDB 8f0a Chain A

Receptor sequence
>8f0aA (length=302) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
MPSLAPMLEKVMPSVVSINVEGSTQKFMALGSGVIIDADKGYVVTNNHVV
DNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMADSDA
LRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNAENYENFIQTDAAINR
GNAGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEY
GQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAG
DVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQS
SQ
3D structure
PDB8f0a Flexible Client-Dependent Cages in the Assembly Landscape of the Periplasmic Protease-Chaperone DegP.
ChainA
Resolution2.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.4.21.107: peptidase Do.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 peptide A M85 A86 L87 H105 L190 N206 R207 G208 A210 A227 I228 A230 M28 A29 L30 H48 L133 N149 R150 G151 A153 A170 I171 A173
BS02 peptide A E264 I267 M268 G269 T270 E271 N273 S291 E207 I210 M211 G212 T213 E214 N216 S234
Gene Ontology
Molecular Function
GO:0004252 serine-type endopeptidase activity
Biological Process
GO:0006508 proteolysis

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:8f0a, PDBe:8f0a, PDBj:8f0a
PDBsum8f0a
PubMed37282495
UniProtP0C0V0|DEGP_ECOLI Periplasmic serine endoprotease DegP (Gene Name=degP)

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