Structure of PDB 8dqv Chain A

Receptor sequence
>8dqvA (length=513) Species: 246196 (Mycolicibacterium smegmatis MC2 155) [Search protein sequence]
LDLFVSPLGRVEGDLDVRVTINDGVVTSAWTEAAMFRGFEIILRGKDPQA
GLIVCPRICGICGGSHLYKSAYALDTAWRTHMPPNATLIRNICQACETLQ
SIPRYFYALFAIDLTNKNYAKSKLYDEAVRRFAPYVGTSYQPGVVLSAKP
VEVYAIFGGQWPHSSFMVPGGVMSAPTLSDVTRAIAILEHWNDNWLEKQW
LGCSVDRWLENKTWNDVLAWVDENESQYNSDCGFFIRYCLDVGLDKYGQG
VGNYLATGTYFEPSLYENPTIEGRNAALIGRSGVFADGRYFEFDQANVTE
DVTHSFYEGNRPLHPFEGETIPVNPEDGRRQGKYSWAKSPRYAVPGLGNV
PLETGPLARRMAASAPDAETHQDDDPLFADIYNAIGPSVMVRQLARMHEG
PKYYKWVRQWLDDLELKESFYTKPVEYAEGKGFGSTEAARGALSDWIVIE
DSKIKNYQVVTPTAWNIGPRDASEVLGPIEQALVGSPIVDAEDPVELGHV
ARSFDSCLVCTVH
3D structure
PDB8dqv Structural basis for bacterial energy extraction from atmospheric hydrogen.
ChainA
Resolution1.52 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.12.99.6: hydrogenase (acceptor).
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 O A R443 C510 R440 C507
BS02 MG A E43 V462 H516 E40 V459 H513
BS03 FCO A C65 H69 A441 R443 L446 P465 T466 C513 C62 H66 A438 R440 L443 P462 T463 C510
BS04 F3S A R60 H166 R57 H163
Gene Ontology
Molecular Function
GO:0008901 ferredoxin hydrogenase activity
GO:0016151 nickel cation binding
GO:0016491 oxidoreductase activity
GO:0033748 hydrogenase (acceptor) activity
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:8dqv, PDBe:8dqv, PDBj:8dqv
PDBsum8dqv
PubMed36890228
UniProtA0QUM7

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