Structure of PDB 8dne Chain A

Receptor sequence
>8dneA (length=371) Species: 224324 (Aquifex aeolicus VF5) [Search protein sequence]
GIRVFDVWKKYKYYKKPQDRLKEIIFRKPFHEELWVLKGINLEIEKGEVL
GIVGPNGAGKSTLLKVITGVTEPDKGFVERSGKVVGLLELGTGFNYELSG
LENIYVNASLLGLSRREIDEKLESIIEFSELDDFINKPLKTYSSGMIMRL
AFSIAIHTEPECFIIDEALAVGDAHFQQKCFRKLKEHKQKGGSIIFVSHD
MNAVKILCDRAILLHKGEIIEEGSPETVTQAYYKLMASLEGNFKAVIKEV
RLKSEHGYTNNFPSGDTLFIELDVEAKEDLQDVVAGILIRDRFGQDIFGI
NTYLMEKKVELKKGKYLFTFKMPLNLAPGKYTLTVALHKIDNVCNFEVNG
FKKEQFVGVCYLPTEFNYRKI
3D structure
PDB8dne Molecular basis for polysaccharide recognition and modulated ATP hydrolysis by the O antigen ABC transporter.
ChainA
Resolution3.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ATP A Y11 Y13 N56 G59 K60 S61 T62 Y11 Y13 N56 G59 K60 S61 T62
BS02 ATP A F134 T141 S143 G145 F134 T141 S143 G145
Gene Ontology
Molecular Function
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0016887 ATP hydrolysis activity
GO:0140359 ABC-type transporter activity
Biological Process
GO:0055085 transmembrane transport
Cellular Component
GO:0016020 membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8dne, PDBe:8dne, PDBj:8dne
PDBsum8dne
PubMed36064941
UniProtO67181

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