Structure of PDB 8dek Chain A

Receptor sequence
>8dekA (length=440) Species: 239935 (Akkermansia muciniphila) [Search protein sequence]
GAEFTRLPVSWTVNPRDAANARAAWKTLSAYHRGKPKSSRKLHVVYVTFK
DRPALEGYRERYDHILKNIQAYYADQMQANGFPPLTFQLDLDERGKLVIH
DAYVDKPMSEMSVQSSGPVSREAARKVLASKGIDIEKEHVLVVCQLPDGV
GPYYGGGFSHQGTGWTCDQEGLDPASFLDTEMMQGGRFKVTRGKNATIYI
GGTAHELGHSFGLPHTGDGWNYPDAGASLMGHGNSTYGDELRHEGKGAYL
APTDALKLASVPLFNGVETELPADASFGRMLGKYVPGSFERLEAIPVKDG
LRLKGRVHLTRPAYGIVAHLDPPGGSDYDSNAVGASLDEKGEFDLTICRP
GYKGGFIEMRVAVLNCDSTRSMITLPVWMDARGTKAPSLAQIVYFGDVQN
LWIRGRTEEARKALAEVERRHGSRSEVKEWLPVWKRALGR
3D structure
PDB8dek A previously uncharacterized O-glycopeptidase from Akkermansia muciniphila requires the Tn-antigen for cleavage of the peptide bond.
ChainA
Resolution2.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN A H223 H227 H233 H205 H209 H215
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