Structure of PDB 8dba Chain A

Receptor sequence

>8dbaA (length=507) Species: 1063 (Cereibacter sphaeroides) [Search protein sequence]

GIGKSPTGIQGFDELTLGGLPTGRPSLVCGSAGCGKTLFASTFLINGVRD
HGEPGVFVTFEERPEDIVNNVASLGFELDKLIEEEKIAIEHIAVDPSLEG
LFLRLELAIDTVGAKRVVLDTIESLFSAFSNPAILRAEIRRLFDWLKERG
LTTVITAERGDGALTRQGLEEYVSDCVILLDHRVENQISTRRLRIVKYRG
TAHGTNEYPFLIDTDGFSVLPVALGLLHQVHEERIASGVPDLDAMMAGGG
FFRGSSILVSGVAGAGKSSLAAHFAAAACARGERAMYFSFEEAADQAVRN
MRSLGLDLGRWRDAGLLRFMATRPTFYSLEMHLAVILREVMRFEPSVVVL
DPISAFTESGDRLEVQSMLLRIVDFLKNRGITGIFTHLLSSLMDGWVLML
NREVNGEFNRELYLLKARGMAHSNQVREFLMSDRGISLLPPHLGEGGALT
GTARKAEEARLRRAEIERQTELGRLQQQIEQRRRRARAQIEALEAELQAE
EIALKAL

3D structure

PDB

8dba From primordial clocks to circadian oscillators.

Chain

Resolution

3.5 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Enzymatic activity

Enzyme Commision number

2.7.11.1: non-specific serine/threonine protein kinase.

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	ADP	A	G34 G36 K37 T38 L39 L75 R201 I222	G33 G35 K36 T37 L38 L74 R191 I212
BS02	MG	A	K278 E302	K267 E291
BS03	ADP	A	G275 G277 K278 S279 S280 L315 R433 M454	G264 G266 K267 S268 S269 L304 R410 M431
BS04	ADP	A	Y208 T211 A212 H213	Y198 T201 A202 H203
BS05	ADP	A	A440 R441 M443 A444 H445	A417 R418 M420 A421 H422

Gene Ontology

	Molecular Function
GO:0005524	ATP binding
GO:0016887	ATP hydrolysis activity

View graph for
Molecular Function

External links

PDB	RCSB:8dba, PDBe:8dba, PDBj:8dba
PDBsum	8dba
PubMed	36949197
UniProt	B9KWX8

[Back to BioLiP]