Structure of PDB 8d5j Chain A

Receptor sequence
>8d5jA (length=275) Species: 10090 (Mus musculus) [Search protein sequence]
MGPHSLRYFVTAVSRPGLGEPRFIAVGYVDDTQFVRFDSDADNPRFEPRA
PWMEQEGPEYWEEQTQRAKSDEQWFRVSLRTAQRYYNQSKGGSHTFQRMF
GCDVGSDWRLLRGYQQFAYDGRDYIALNEDLKTWTAADTAALITRRKWEQ
AGDAEYYRAYLEGECVEWLRRYLELGNETLLRTDSPKAHVTYHPRSQVDV
TLRCWALGFYPADITLTWQLNGEDLTQDMELVETRPAGDGTFQKWAAVVV
PLGKEQNYTCHVHHKGLPEPLTLRW
3D structure
PDB8d5j The complex of Pre-mRNA-Processing Factor 19 (Prpf19) neoantigen KYLQVASHV Presented by H2-Kd
ChainA
Resolution1.95 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A Y7 V9 E62 Q63 R66 S69 D70 W73 V76 T80 Y84 R97 F99 T143 K146 W147 D152 Y155 Y156 Y159 W167 Y171 Y8 V10 E63 Q64 R67 S70 D71 W74 V77 T81 Y85 R98 F100 T144 K147 W148 D153 Y156 Y157 Y160 W168 Y172
External links
PDB RCSB:8d5j, PDBe:8d5j, PDBj:8d5j
PDBsum8d5j
PubMed
UniProtP01902|HA1D_MOUSE H-2 class I histocompatibility antigen, K-D alpha chain (Gene Name=H2-K1)

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