Structure of PDB 8cl5 Chain A

Receptor sequence
>8cl5A (length=129) Species: 241518 (Asplenium bulbiferum subsp. bulbiferum) [Search protein sequence]
KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGS
TDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVS
DGNGMNAWVAWRNRCKGTDVQAWIRGCRL
3D structure
PDB8cl5 A multi-reservoir extruder for time-resolved serial protein crystallography and compound screening at X-ray free-electron lasers.
ChainA
Resolution1.31 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.1.17: lysozyme.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 NA A Y53 G54 I55 L56 I58 L83 S91 Y53 G54 I55 L56 I58 L83 S91
BS02 NA A R45 G49 S50 T51 D66 R68 T69 R45 G49 S50 T51 D66 R68 T69
Gene Ontology
Molecular Function
GO:0003796 lysozyme activity
GO:0005515 protein binding
GO:0016231 beta-N-acetylglucosaminidase activity
GO:0016798 hydrolase activity, acting on glycosyl bonds
GO:0042802 identical protein binding
Biological Process
GO:0016998 cell wall macromolecule catabolic process
GO:0031640 killing of cells of another organism
GO:0042742 defense response to bacterium
GO:0050829 defense response to Gram-negative bacterium
GO:0050830 defense response to Gram-positive bacterium
Cellular Component
GO:0005576 extracellular region
GO:0005615 extracellular space
GO:0005737 cytoplasm
GO:0005783 endoplasmic reticulum

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8cl5, PDBe:8cl5, PDBj:8cl5
PDBsum8cl5
PubMed38042952
UniProtP00698|LYSC_CHICK Lysozyme C (Gene Name=LYZ)

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