Structure of PDB 8bty Chain A

Receptor sequence
>8btyA (length=934) Species: 1311 (Streptococcus agalactiae) [Search protein sequence]
TSKATIRDLNDPSQVKTLQEKAGKGAGTVVAVIDAGFDKNHEAWRLTDKT
KARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYSKDGKTAVDQEHGTH
VSGILSGNAPSETKEPYRLEGAMPEAQLLLMRVEIVNGLADYARNYAQAI
RDAINLGAKVINMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGND
SSFGGKTRLPLADHPDYGVVGTPAAADSTLTVASYSPDKQLTETVRVKTA
QDKEMPVLSTNRFEPNKAYDYAYANRGTKEDDFKDVKGKIALIERGDIDF
KDKIAKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD
NPQKTITFNATPKVLPTASGTKLSRFSSWGLTADGNIKPDIAAPGQDILS
SVANNKYAKLSGTSMSAPLVAGIMGLLQKQYETQYPDMTPSERLDLAKKV
LMSSATALYDEDEKAYFSPRQQGAGAVDAKKASAATMYVTDKDNTSSKVH
LNNVSDKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYEA
SWQKITIPANSSKQVTVPIDASRFSKDLLAQMKNGYFLEGFVRFKQDPKK
EELMSIPYIGFRGDFGNLSALEKPIYDSKDGSSYYHEANSDAKDQLDGDG
LQFYALKNNFTALTTESNPWTIIKAVKEGVENIEDIESSEITETILAGTF
AKQDDDSHYYIHRHANGKPYAAISPNGDGNRDYVQFQGTFLRNAKNLVAE
VLDKEGNVVWTSEVTEQVVKNYNNDLASTLGSTRFEKTRWDGKDKDGKVV
ANGTYTYRVRYTPISSGAKEQHTDFDVIVDNTTPEVATSATFSTEDRRLT
LASKPKTSQPVYRERIAYTYMDEDLPTTEYISPNEDGTFTLPEEAETTEG
ATVPLKMSDFTYVVEDMAGNITYTPVTKLLEGHS
3D structure
PDB8bty The 1.7 angstrom crystal structure of the C5a peptidase from Streptococcus agalactiae (ScpB) reveals an active site competent for catalysis.
ChainA
Resolution1.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.4.21.110: C5a peptidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A R393 D397 F398 I425 R295 D299 F300 I327
BS02 CA A S822 N824 D826 N828 D830 S724 N726 D728 N730 D732
Gene Ontology
Molecular Function
GO:0004252 serine-type endopeptidase activity
GO:0008236 serine-type peptidase activity
Biological Process
GO:0006508 proteolysis
Cellular Component
GO:0005618 cell wall
GO:0016020 membrane

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Molecular Function
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Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8bty, PDBe:8bty, PDBj:8bty
PDBsum8bty
PubMed37921533
UniProtQ53637

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