Structure of PDB 8bdb Chain A

Receptor sequence
>8bdbA (length=480) Species: 42003 (Griffithsia monilis) [Search protein sequence]
NSVEERTRIKNERYESGVIPYAKMGYWDPNYAVKDTDILALFRVSPQPGV
DPVEASAAVAGESSTATWTVVWTDLLTACDLYRAKAYKVESVPNTSDQYF
AYISYDIDLFEEGSIANLTASIIGNVFGFKAVKALRLEDMRIPVAYLKTF
QGPATGIVVERERMDKFGRPFLGATVKPKLGLSGKNYGRVVYEGLRGGLD
FLKDDENINSQPFMRWKERFLYSIEAVNRSIAATGEVKGHYMNVTAATME
EMYERAEFAKQLGTVIIMIDLVIGYTAIQTMGIWARKNDMILHLHRAGNS
TYSRQKIHGMNFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMIRGFYNTL
LLPYLEVNLPQGIFFQQDWASLRKVTPVASGGIHCGQMHQLLDYLGNDVV
LQFGGGTIGHPDGIQAGATANRVALESMVIARNEGRDYVAEGPQILRDAA
KTCGPLQTALDLWKDITFNYTSTDTADFVE
3D structure
PDB8bdb Grafting Rhodobacter sphaeroides with red algae Rubisco to accelerate catalysis and plant growth.
ChainA
Resolution1.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 4.1.1.39: ribulose-bisphosphate carboxylase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MG A K205 D207 E208 K203 D205 E206
BS02 CAP A T177 K179 K205 D207 E208 H297 R298 H330 K337 L338 S382 G383 G406 G407 T175 K177 K203 D205 E206 H295 R296 H328 K335 L336 S380 G381 G404 G405
BS03 BCT A T469 N471 T467 N469
BS04 BCT A E113 E114 E111 E112
BS05 BCT A T469 F470 T467 F468
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0004497 monooxygenase activity
GO:0016829 lyase activity
GO:0016984 ribulose-bisphosphate carboxylase activity
GO:0046872 metal ion binding
Biological Process
GO:0015977 carbon fixation
GO:0015979 photosynthesis
GO:0019253 reductive pentose-phosphate cycle
Cellular Component
GO:0009507 chloroplast

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8bdb, PDBe:8bdb, PDBj:8bdb
PDBsum8bdb
PubMed37291398
UniProtA7UM67

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