Structure of PDB 8b0i Chain A

Receptor sequence
>8b0iA (length=270) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPDLARTLADREIS
AAVSIDVRNMPESPEIFEQAMSNLPDAFSPQLLFLDADRNTLIRRYSDTL
ESAIDKESDLLEPLRSRADLIVDTSEMSVHELAEMLRTRLLGKRERELTM
VFESFGFKHGIPIDADYVFDVRFLPNPHWDPKLRPMTGLDKPVAAFLDRH
TEVHNFIYQTRSYLELWLPMLETNNRSYLTVAIGCTGGKHRSVYIAEQLA
DYFRSRGKNVQSRHRTLEKR
3D structure
PDB8b0i Structure of a bacterial ribonucleoprotein complex central to the control of cell envelope biogenesis.
ChainA
Resolution4.28 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna A K170 I175 P197 P204 T248 K158 I163 P185 P192 T236
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0005525 GTP binding
GO:0042802 identical protein binding
GO:0060090 molecular adaptor activity
GO:0097367 carbohydrate derivative binding
Biological Process
GO:0050779 RNA destabilization
GO:0051289 protein homotetramerization
Cellular Component
GO:0032991 protein-containing complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8b0i, PDBe:8b0i, PDBj:8b0i
PDBsum8b0i
PubMed36504162
UniProtP0A894|RAPZ_ECOLI RNase adapter protein RapZ (Gene Name=rapZ)

[Back to BioLiP]