Structure of PDB 7zlw Chain A

Receptor sequence
>7zlwA (length=152) Species: 10090 (Mus musculus) [Search protein sequence]
MANSERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFLQASEDLLKE
HYTDLKDRPFFTGLVKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSK
PGTIRGDFCIQVGRNIIHGSDSVKSAEKEISLWFQPEELVEYKSCAQNWI
YE
3D structure
PDB7zlw Nucleoside diphosphate kinases 1 and 2 regulate a protective liver response to a high-fat diet.
ChainA
Resolution2.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.4.6: nucleoside-diphosphate kinase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 ADP A K12 Y52 L55 F60 R88 T94 R105 V112 N115 K12 Y52 L55 F60 R88 T94 R105 V112 N115
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0004536 DNA nuclease activity
GO:0004550 nucleoside diphosphate kinase activity
GO:0005524 ATP binding
GO:0005525 GTP binding
GO:0008408 3'-5' exonuclease activity
GO:0016301 kinase activity
GO:0042802 identical protein binding
GO:0043024 ribosomal small subunit binding
GO:0046872 metal ion binding
Biological Process
GO:0006183 GTP biosynthetic process
GO:0006228 UTP biosynthetic process
GO:0006231 dTMP biosynthetic process
GO:0006241 CTP biosynthetic process
GO:0006259 DNA metabolic process
GO:0006897 endocytosis
GO:0007399 nervous system development
GO:0007595 lactation
GO:0009117 nucleotide metabolic process
GO:0016310 phosphorylation
GO:0030154 cell differentiation
GO:0030879 mammary gland development
GO:0050679 positive regulation of epithelial cell proliferation
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0005769 early endosome
GO:0005829 cytosol
GO:0032587 ruffle membrane
GO:0043209 myelin sheath

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:7zlw, PDBe:7zlw, PDBj:7zlw
PDBsum7zlw
PubMed37672589
UniProtP15532|NDKA_MOUSE Nucleoside diphosphate kinase A (Gene Name=Nme1)

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