Structure of PDB 7ym5 Chain A

Receptor sequence
>7ym5A (length=304) Species: 28901 (Salmonella enterica) [Search protein sequence]
FTSFNGKDYPLCFLDEKTPLLFQWFERNPARFGKNDIPIINTEKNPYLNN
IIKAATIEKERLIGIFVDGDFFPGQKDAFSKLEYDYENIKVIYRNDIDFS
MYDKKLSEIYMENISKQESMPEEKRDCHLLQLLKKELSDIQEGNDSLIKS
YLLGHGWFDFYRNMAMLKAGQLFLEADKVGCYDLSTNSGCIYLDADMIIT
EKLGGIYIPDGIAVHVERIDGRASMENGIIAVDRNNHPALLAGLEIMHTK
FDADPYSDGVCNGIRKHFNYSLNEDYNSFCDFIEFKHDNIIMNTSQFTQS
SWAR
3D structure
PDB7ym5 Crystal structure of the Salmonella effector SseK1
ChainA
Resolution3.45 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.4.1.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MN A D225 N322 S324 D196 N293 S295
BS02 UDP A Q50 W51 F52 Y74 D223 D225 S324 S329 S330 W331 Q23 W24 F25 Y47 D194 D196 S295 S300 S301 W302
Gene Ontology
Molecular Function
GO:0016757 glycosyltransferase activity
GO:0046872 metal ion binding
GO:0090729 toxin activity
GO:0106362 protein-arginine N-acetylglucosaminyltransferase activity
Biological Process
GO:0035821 modulation of process of another organism
Cellular Component
GO:0005576 extracellular region
GO:0030430 host cell cytoplasm
GO:0044164 host cell cytosol

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Cellular Component
External links
PDB RCSB:7ym5, PDBe:7ym5, PDBj:7ym5
PDBsum7ym5
PubMed36369343
UniProtQ9L9J3|SSEK1_SALTY Protein-arginine N-acetylglucosaminyltransferase SseK1 (Gene Name=sseK1)

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