Structure of PDB 7y9p Chain A

Receptor sequence
>7y9pA (length=357) Species: 4924 (Scheffersomyces stipitis) [Search protein sequence]
TANPSLVLNKIDDISFETYDAPEISEPTDVLVQVKKTGICGSDIHFYAHG
RIGNFVLTKPMVLGHESAGTVVQVGKGVTSLKVGDNVAIEPGIPCRFCDE
CKSGHYNLCPHMAFAATPNEPNPPGTLCKYFKSPEDFLVKLPDHVSLELG
ALVEPLSVGVHASKLGSVAFGDYVAVFGAGPVGLLAAAVAKTFGAKGVIV
VDIFDNKLKMAKDIGAATHTFNSKTGGSEELIKAFGGNVPNVVLECTGAE
PCIKLGVDAIAPGGRFVQVGNAAGPVSFPITVFAMKELTLFGSFRYGFND
YKTAVGIFDTNYQNGRENAPIDFEQLITHRYKFKDAIEAYDLVRAGKGAV
KCLIDGP
3D structure
PDB7y9p Molecular evolutionary insight of structural zinc atom in yeast xylitol dehydrogenases and its application in bioethanol production by lignocellulosic biomass.
ChainA
Resolution2.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.1.1.9: D-xylulose reductase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN A C41 H66 E67 C40 H65 E66
BS02 ZN A C96 C99 C102 C110 C95 C98 C101 C109
Gene Ontology
Molecular Function
GO:0003939 L-iditol 2-dehydrogenase (NAD+) activity
GO:0008270 zinc ion binding
GO:0016491 oxidoreductase activity
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0046526 D-xylulose reductase activity
GO:0046872 metal ion binding
Biological Process
GO:0006062 sorbitol catabolic process
GO:0019569 L-arabinose catabolic process to xylulose 5-phosphate
GO:0042732 D-xylose metabolic process

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Molecular Function
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Biological Process
External links
PDB RCSB:7y9p, PDBe:7y9p, PDBj:7y9p
PDBsum7y9p
PubMed36732376
UniProtP22144|XYL2_PICST D-xylulose reductase (Gene Name=XYL2)

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