Structure of PDB 7wkm Chain A

Receptor sequence
>7wkmA (length=339) Species: 5062 (Aspergillus oryzae) [Search protein sequence]
HMLGKIALEEAFALPRFEEKTRWWASLFSTDAETHVKEITDINKIRIEHA
DKHGVGYQILSYTAPGVQDIWDPVEAQALAVEINDYIAEQVRVNPDRFGA
FATLSMHNPKEAADELRRCVEKYGFKGALVNDTQRAGPDGDDMIFYDNAD
WDIFWQTCTELDVPFYMHPRNPTGTIYEKLWADRKWLVGPPLSFAHGVSL
HVLGMVTNGVFDRHPKLQIIMGHLGEHVPFDMWRINHWFEDRKKLLGLAE
TCKKTIRDYFAENIWITTSGHFSTTTLNFCMAEVGSDRILFSIDYPFETF
SDACEWFDNAELNGTDRLKIGRENAKKLFKLDSYKDSSA
3D structure
PDB7wkm Molecular mechanism of reversible decarboxylase with efficient CO2 fixation
ChainA
Resolution1.8 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 4.1.1.46: o-pyrocatechuate decarboxylase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 MG A E8 H167 D293 E9 H168 D294
BS02 CAQ A W23 F27 H167 F193 D293 F296 W24 F28 H168 F194 D294 F297
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity
GO:0016831 carboxy-lyase activity
GO:0050150 o-pyrocatechuate decarboxylase activity
Biological Process
GO:0019748 secondary metabolic process
GO:0043640 benzoate catabolic process via hydroxylation
Cellular Component
GO:0005575 cellular_component
GO:0005737 cytoplasm
GO:0005829 cytosol

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:7wkm, PDBe:7wkm, PDBj:7wkm
PDBsum7wkm
PubMed
UniProtP80402|DBD23_ASPOR 2,3-dihydroxybenzoate decarboxylase (Gene Name=AO090005000447)

[Back to BioLiP]