Structure of PDB 7vud Chain A

Receptor sequence
>7vudA (length=535) Species: 93977 (Osmanthus fragrans) [Search protein sequence]
DAQRTGNIVAVKPKPSQGLTSKAIDWLEWLFVKMMHDSKQPLHYLSGNFA
PVDETPPLKDLPVTGHLPECLNGEFVRVGPNPKFASIAGYHWFDGDGMIH
GMRIKDGKATYVSRYVQTSRLKQEEFFGRAMFMKIGDLKGMFGLLMVNMQ
MLRAKLKVLDISYGIGTANTALVYHHGKLLALSEADKPYAIKVLEDGDLQ
TIGLLDYDKRLAHSFTAHPKVDPFTGEMFTFGYSHTPPYVTYRVISKDGA
MNDPVPITVSGPIMMHDFAITENYAIFMDLPLYFKPKEMVKDKKFIFSFD
ATQKARFGILPRYAKNELLIKWFELPNCFIFHNANAWEEGDEVVLITCRL
ENPDLDMVNSTVKERLDNFKNELYEMRFNLQNGLASQKKLSVSAVDFPRV
NESYTTRKQRYVYGTTLDKIAKVTGIIKFDLHAEPETGKEKLELGGNVKG
IFDLGPGRFGSEAVFVPRHPGITSEEDDGYLIFFVHDENTGKSAVNVIDA
KTMSPDPVAVVELPKRVPYGFHAFFVTEDQLQEQA
3D structure
PDB7vud Carotenoid Cleavage Dioxygenase 1 from Osmanthus fragrans
ChainA
Resolution2.8 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 1.14.99.n4: carotenoid 9,10-dioxygenase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 OXN A F98 E189 Y238 F336 D401 F526 F93 E184 Y233 F331 D396 F521
BS02 OXN A K326 W327 Q386 N387 G388 K321 W322 Q381 N382 G383
BS03 OXN A S21 L161 S16 L156
Gene Ontology
Molecular Function
GO:0010436 carotenoid dioxygenase activity
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0046872 metal ion binding
GO:0051213 dioxygenase activity
Biological Process
GO:0016121 carotene catabolic process
Cellular Component
GO:0009570 chloroplast stroma

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7vud, PDBe:7vud, PDBj:7vud
PDBsum7vud
PubMed
UniProtD4QE74

[Back to BioLiP]