Structure of PDB 7vqj Chain A

Receptor sequence
>7vqjA (length=228) Species: 562 (Escherichia coli) [Search protein sequence]
DQRFGDLVFRQLAPNVWQHTSYLDMPGFGAVASNGLIVRDGGRVLVVDTA
WTDDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAAGIATYAN
ALSNQLAPQEGMVAAQHSLTFAANGWVEPATAPNFGPLKVFYPGPGHTSD
NITVGIDGTDIAFGGCLIKDSKAKSLGNLGDADTEHYAASARAFGAAFPK
ASMIVMSHSAPDSRAAITHTARMADKLR
3D structure
PDB7vqj Crystal structure of NDM-1 in complex with hydrolyzed 1u.
ChainA
Resolution2.45 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.5.2.6: beta-lactamase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN A H120 H122 H189 H78 H80 H147
BS02 ZN A D124 C208 H250 D82 C166 H208
BS03 7T6 A W93 H122 D124 H189 C208 K211 G219 N220 H250 W51 H80 D82 H147 C166 K169 G177 N178 H208
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity
GO:0046872 metal ion binding
Biological Process
GO:0017001 antibiotic catabolic process

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Molecular Function
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Biological Process
External links
PDB RCSB:7vqj, PDBe:7vqj, PDBj:7vqj
PDBsum7vqj
PubMed
UniProtA0A0A7Y424

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