Structure of PDB 7vm0 Chain A

Receptor sequence
>7vm0A (length=386) Species: 1423 (Bacillus subtilis) [Search protein sequence]
ANVLMIGFPGEGHINPSIGVMKELKSRGENITYYAVKEYKEKITALDIEF
REYHDFRGFGKNATGDEERDFTEMLCAFLKACKDIATHIYEEVKHESYDY
VIYDHHLLAGKVIANMLKLPRFSLCTTFAMNEEFEDSPHYESYQQLAETL
NADFQAEIKKPFDVFLADGDLTIVFTSRGFQPLAEQFGERYVFVGPSITE
RADFPFDQIDNENVLFISMGTIFNNQKQFFNQCLEVCKDFDGKVVLSIGK
HIKTSELNDIPENFIVRPYVPQLEILKRASLFVTHGGMNSTSEGLYFETP
LVVIPMGGDQFVVADQVEKVGAGKVIKKEELSESLLKETIQEVMNNRSYA
EKAKEIGQSLKAAGGSKKAADSILEAVKQKTQSANA
3D structure
PDB7vm0 Highly efficient production of rebaudioside D enabled by structure-guided engineering of bacterial glycosyltransferase YojK.
ChainA
Resolution1.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.4.1.-
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 UDP A E12 N16 R217 T240 S266 Y288 V289 Q291 H304 G306 N308 S309 E312 E11 N15 R201 T221 S247 Y269 V270 Q272 H285 G287 N289 S290 E293
Gene Ontology
Molecular Function
GO:0008194 UDP-glycosyltransferase activity
GO:0016757 glycosyltransferase activity
GO:0016758 hexosyltransferase activity
Biological Process
GO:0009058 biosynthetic process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:7vm0, PDBe:7vm0, PDBj:7vm0
PDBsum7vm0
PubMed36091437
UniProtO31853|YOJK_BACSU Uncharacterized UDP-glucosyltransferase YojK (Gene Name=yojK)

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