Structure of PDB 7vj5 Chain A

Receptor sequence
>7vj5A (length=447) Species: 192952 (Methanosarcina mazei Go1) [Search protein sequence]
MNPKRIRALKSGKQGDGPVVYWMSRDQRAEDNWALLFSRAIAKEANVPVV
VVFCLTDEFLEAGIRQYEFMLKGLQELEVSLSRKKIPSFFLRGDPGEKIS
RFVKDYNAGTLVTDFSPLRIKNQWIEKVISGISIPFFEVDAHNVVPCWEA
SQKHEYAAHTFRPKLYALLPEFLEEFPELEPNSTLSDVLETGVKALLPER
ALLKNKDPLFEPWHFEPGEKAAKKVMESFIADRLDSYGALRNDPTKNMLS
NLSPYLHFGQISSQRVVLEVEKAESNPGSKKAFLDEILIWKEISDNFCYY
NPGYDGFESFPSWAKESLNAHRNDVRSHIYTLEEFEAGKTHDPLWNASQM
ELLSTGKMHGYTRMYWAKKILEWSESPEKALEIAICLNDRYELDGRDPNG
YAGIAWSIGGVHDRAWGEREVTGKIRYMSYEGCKRKFDVKLYIEKYS
3D structure
PDB7vj5 Serial crystallography captures dynamic control of sequential electron and proton transfer events in a flavoenzyme.
ChainA
Resolution1.87 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 4.1.99.3: deoxyribodipyrimidine photo-lyase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FAD A Y252 L264 S265 N266 S268 E301 I302 W305 K306 K372 R378 N403 D409 N414 G415 G418 S422 Y237 L249 S250 N251 S253 E286 I287 W290 K291 K357 R363 N388 D394 N399 G400 G403 S407
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0003677 DNA binding
GO:0003904 deoxyribodipyrimidine photo-lyase activity
GO:0016829 lyase activity
Biological Process
GO:0000719 photoreactive repair
GO:0006281 DNA repair

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Molecular Function
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Biological Process
External links
PDB RCSB:7vj5, PDBe:7vj5, PDBj:7vj5
PDBsum7vj5
PubMed35393554
UniProtQ8PYK9

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