Structure of PDB 7vj1 Chain A

Receptor sequence
>7vj1A (length=450) Species: 192952 (Methanosarcina mazei Go1) [Search protein sequence]
MNPKRIRALKSGKQGDGPVVYWMSRDQRAEDNWALLFSRAIAKEANVPVV
VVFCLTDEFLEAGIRQYEFMLKGLQELEVSLSRKKIPSFFLRGDPGEKIS
RFVKDYNAGTLVTDFSPLRIKNQWIEKVISGISIPFFEVDAHNVVPCWEA
SQKHEYAAHTFRPKLYALLPEFLEEFPELEPNSVVETLSDVLETGVKALL
PERALLKNKDPLFEPWHFEPGEKAAKKVMESFIADRLDSYGALRNDPTKN
MLSNLSPYLHFGQISSQRVVLEVEKAESNPGSKKAFLDEILIWKEISDNF
CYYNPGYDGFESFPSWAKESLNAHRNDVRSHIYTLEEFEAGKTHDPLWNA
SQMELLSTGKMHGYTRMYWAKKILEWSESPEKALEIAICLNDRYELDGRD
PNGYAGIAWSIGGVHDRAWGEREVTGKIRYMSYEGCKRKFDVKLYIEKYS
3D structure
PDB7vj1 Serial crystallography captures dynamic control of sequential electron and proton transfer events in a flavoenzyme.
ChainA
Resolution2.25 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 4.1.99.3: deoxyribodipyrimidine photo-lyase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FAD A Y252 L264 S265 N266 S268 L271 E301 I302 W305 K306 K372 R378 N403 D409 N414 G415 G418 I419 Y240 L252 S253 N254 S256 L259 E289 I290 W293 K294 K360 R366 N391 D397 N402 G403 G406 I407
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0003677 DNA binding
GO:0003904 deoxyribodipyrimidine photo-lyase activity
GO:0016829 lyase activity
Biological Process
GO:0000719 photoreactive repair
GO:0006281 DNA repair

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Molecular Function
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Biological Process
External links
PDB RCSB:7vj1, PDBe:7vj1, PDBj:7vj1
PDBsum7vj1
PubMed35393554
UniProtQ8PYK9

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