Structure of PDB 7viz Chain A

Receptor sequence
>7vizA (length=449) Species: 192952 (Methanosarcina mazei Go1) [Search protein sequence]
MNPKRIRALKSGKQGDGPVVYWMSRDQRAEDNWALLFSRAIAKEANVPVV
VVFCLTDEFLEAGIRQYEFMLKGLQELEVSLSRKKIPSFFLRGDPGEKIS
RFVKDYNAGTLVTDFSPLRIKNQWIEKVISGISIPFFEVDAHNVVPCWEA
SQKHEYAAHTFRPKLYALLPEFLEEFPELEPNSVETLSDVLETGVKALLP
ERALLKNKDPLFEPWHFEPGEKAAKKVMESFIADRLDSYGALRNDPTKNM
LSNLSPYLHFGQISSQRVVLEVEKAESNPGSKKAFLDEILIWKEISDNFC
YYNPGYDGFESFPSWAKESLNAHRNDVRSHIYTLEEFEAGKTHDPLWNAS
QMELLSTGKMHGYTRMYWAKKILEWSESPEKALEIAICLNDRYELDGRDP
NGYAGIAWSIGGVHDRAWGEREVTGKIRYMSYEGCKRKFDVKLYIEKYS
3D structure
PDB7viz Serial crystallography captures dynamic control of sequential electron and proton transfer events in a flavoenzyme.
ChainA
Resolution2.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 4.1.99.3: deoxyribodipyrimidine photo-lyase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FAD A Y252 L264 S265 N266 S268 L271 E301 I302 W305 K372 R378 N403 D409 N414 G415 G418 I419 Y239 L251 S252 N253 S255 L258 E288 I289 W292 K359 R365 N390 D396 N401 G402 G405 I406
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0003677 DNA binding
GO:0003904 deoxyribodipyrimidine photo-lyase activity
GO:0016829 lyase activity
Biological Process
GO:0000719 photoreactive repair
GO:0006281 DNA repair

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Molecular Function
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Biological Process
External links
PDB RCSB:7viz, PDBe:7viz, PDBj:7viz
PDBsum7viz
PubMed35393554
UniProtQ8PYK9

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