Structure of PDB 7vac Chain A

Receptor sequence

>7vacA (length=217) Species: 10090 (Mus musculus)

QAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLI
GRTNNRVPGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWYSNHFIF
GSGTKVTVLKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQ
WKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVT
HQGLSSPVTKSFNRGEC

3D structure

• PDB: 7vac Site-specific GalNAc modification on a MUC1 neoantigen epitope forms a basis for high-affinity antibody binding
• Chain: A
• Resolution: 3.5 Å

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	A	Y34 N36 R52 W93	Y34 N36 R52 W93

External links

• PDB: RCSB:7vac, PDBe:7vac, PDBj:7vac
• PDBsum: 7vac