Structure of PDB 7ulf Chain A

Receptor sequence
>7ulfA (length=247) Species: 224325 (Archaeoglobus fulgidus DSM 4304) [Search protein sequence]
VEVFPVEGLPLIKEGDDLAELISSRVRFEDGDVLVVCSTVISKAEGRIRR
LEEFNPSERAKEIAARIGKPAEFVQAVLEESEEVLLDFPFLLVKAKFGNV
CVNAGIDASNVEEGSLLLPPLDPDGSAEKLRRRILELTGKRVGVIITDTN
GRCFRRGVVGFAIGISGVKAMKDWIGRKDLYGRELEVTVECVADEIAAFA
NLLMGEGGDGIPAVVVRGLNVAGEGSMEEIYRSEEEDVIRRCLKRCL
3D structure
PDB7ulf A Universal Mechanism for Poly-glutamylation
ChainA
Resolution1.61 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 6.3.2.31: coenzyme F420-0:L-glutamate ligase.
6.3.2.34: coenzyme F420-1:gamma-L-glutamate ligase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GGL A D109 A110 S111 D107 A108 S109
BS02 GTP A L11 P12 L13 I14 C39 S40 T41 V42 K45 D109 N112 T151 M206 E208 G209 G212 I213 P214 L9 P10 L11 I12 C37 S38 T39 V40 K43 D107 N110 T149 M204 E206 G207 G210 I211 P212
BS03 MN A T151 E208 T149 E206
BS04 MN A D109 D150 D107 D148
Gene Ontology
Molecular Function
GO:0005525 GTP binding
GO:0016874 ligase activity
GO:0043773 coenzyme F420-0 gamma-glutamyl ligase activity
GO:0046872 metal ion binding
GO:0052618 coenzyme F420-0:L-glutamate ligase activity
GO:0052619 coenzyme F420-1:gamma-L-glutamate ligase activity
Biological Process
GO:0052645 F420-0 metabolic process

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Molecular Function
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Biological Process
External links
PDB RCSB:7ulf, PDBe:7ulf, PDBj:7ulf
PDBsum7ulf
PubMed
UniProtO28028|COFE_ARCFU Coenzyme F420:L-glutamate ligase (Gene Name=cofE)

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