Structure of PDB 7uk7 Chain A

Receptor sequence
>7uk7A (length=389) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
HHMLRHNVPVRRDLDQIAADNGFDFHIIDNEIYWDESRAYRFTLRQIEEQ
IEKPTAELHQMCLEVVDRAVKDEEILTQLAIPPLYWDVIAESWRARDPSL
YGRMDFAWCGNAPVKLLEYNADTPTSLYESAYFQWLWLEDARRSGIIPRD
ADQYNAIQERLISRFSELYSREPFYFCCCQDTDEDRSTVLYLQDCAQQAG
QESRFIYIEDLGLGVGGVLTDLDDNVIQRAFKLYPLEWMMRDDNGPLLRK
RREQWVEPLWKSILSNKGLMPLLWRFFPGHPNLLASWFDGEKPQIAAGES
YVRKPIYSREGGNVTIFDGKNNVVDHADGDYADEPMIYQAFQPLPRFGDS
YTLIGSWIVDDEACGMGIREDNTLITKDTSRFVPHYIAG
3D structure
PDB7uk7 Escherichia coli YgiC and YjfC Possess Peptide─Spermidine Ligase Activity.
ChainA
Resolution1.95 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 6.3.1.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ADP A L115 E116 K265 V300 K302 R307 E308 G309 Q337 F339 Q340 L372 I373 T374 L117 E118 K267 V302 K304 R309 E310 G311 Q339 F341 Q342 L374 I375 T376
BS02 MG A E116 N118 E118 N120
BS03 MG A D103 E116 D105 E118
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0016874 ligase activity
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:7uk7, PDBe:7uk7, PDBj:7uk7
PDBsum7uk7
PubMed36745518
UniProtP33222|YJFC_ECOLI Putative acid--amine ligase YjfC (Gene Name=yjfC)

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