Structure of PDB 7soj Chain A

Receptor sequence
>7sojA (length=818) Species: 3847 (Glycine max) [Search protein sequence]
HKIKGTVVLMPKNELEVNLNAFLGRSVSLQLISATKADAHGKGKVGKDTF
LEGINTSLPTLGAGESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLT
LEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETPAPLVEYRE
EELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFP
YPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLKSKDALEIGTKSLS
QIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDVISTIIPLPVI
KELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLE
EFPPKSNLDPAIYGDQSSKITADSLDLDGYTMDEALGSRRLFMLDYHDIF
MPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHVSQVVLPAK
EGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVL
HPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSVEMSSAVY
KNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAI
KTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQT
LEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTP
EYEEMINNHEKAYLRTITSKLPTLISLSAIEILSTHASDEVYLGQRDNPH
WTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLY
PSSEEGLTFRGIPNSISI
3D structure
PDB7soj Temporal and spatial resolution of distal protein motions that activate hydrogen tunneling in soybean lipoxygenase.
ChainA
Resolution1.85 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 1.13.11.12: linoleate 13S-lipoxygenase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 FE A H499 H504 H690 N694 I839 H478 H483 H669 N673 I818
Gene Ontology
Molecular Function
GO:0005506 iron ion binding
GO:0016165 linoleate 13S-lipoxygenase activity
GO:0016491 oxidoreductase activity
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0046872 metal ion binding
GO:0051213 dioxygenase activity
GO:0102299 linolenate 9R-lipoxygenase activity
Biological Process
GO:0006633 fatty acid biosynthetic process
GO:0019395 fatty acid oxidation
GO:0031408 oxylipin biosynthetic process
GO:0034440 lipid oxidation
Cellular Component
GO:0005737 cytoplasm

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:7soj, PDBe:7soj, PDBj:7soj
PDBsum7soj
PubMed36867685
UniProtP08170|LOX1_SOYBN Seed linoleate 13S-lipoxygenase-1 (Gene Name=LOX1.1)

[Back to BioLiP]