Structure of PDB 7sb3 Chain A

Receptor sequence
>7sb3A (length=1178) Species: 31631 (Human coronavirus OC43) [Search protein sequence]
VIGDLKCPLDSRTGSLNNSISTATVDVTNGLGTYYVLDRVYLNTTLFLNG
YYPTSGSTYRNMALKGTDKLSTLWFKPPFLSDFINGIFAKVKNTKVFKDG
VMYSEFPAITIGSTFVNTSYSVVVQPRTINSLQGLLEVSVCQYNMCEYPH
TICHPKLGNHFKELWHMDVSCLYKRNFTYDVNATYLYFHFYQEGGTFYAY
FTDTGVVTKFLFNVYLGMALSHYYVMPLTCISRRDIGFTLEYWVTPLTSR
QYLLAFNQDGIIFNAVDCMSDFMSEIKCKTQSIAPPTGVYELNGYTVQPI
ADVYRRKPDLPNCNIEAWLNDKSVPSPLNWERKTFSNCNFNMSSLMSFIQ
ADSFTCNNIDAAKIYGMCFSSITIDKFAIPNGRKVDLQLGNLGYLQSFNY
RIDTTATSCQLYYNLPAANVSVSRFNPSTWNKRFGFIENSVFKPQPAGVL
TNHDVVYAQHCFKAPKNFCPCKLNSNGIGTCPAGTNYLTCHNLCNPDPIT
FTGPYKCPQTKSLVGIGEHCSGLAVKSDYCGGNPCTCQPQAFLGWSADSC
LQGDKCNIFANLILHDVNSGLTCSTDLQKANTDIKLGVCVNYDLYGISGQ
GIFVEVNATYYNSWQNLLYDSNGNLYGFRDYITNRTFMIRSCYSGRVSAA
FHANSSEPALLFRNIKCNYVFNNSLIRQLQPINYFDSYLGCVVNAYNSTA
ISVQTCDLTVGSGYCVDYSKNTTGYRFTNFEPFTVNSVNDSLEPVGGLYE
IQIPSEFTIGNMEEFIQTSSPKVTIDCAAFVCGDYAACKSQLVEYGSFCD
NINAILTEVNELLDTTQLQVANSLMNGVTLSTKLKDGVNFNVDDINFSSV
LGCLSSRSAIEDLLFDKVKLSDVGFVAAYNNCTGGAEIRDLICVQSYKGI
KVLPPLLSENQISGYTLAATSASLFPPWTAAAGVPFYLNVQYRINGLGVT
MDVLSQNQKLIANAFNNALDAIQEGFDATNSALVKIQAVVNANAEALNNL
LQQLSNRFGAISSSLQEILSRLDPPEAEAQIDRLINGRLTALNAYVSQQL
SDSTLVKFSAAQAMEKVNECVKSQSSRINFCGNGNHIISLVQNAPYGLYF
IHFSYVPTKYVTAKVSPGLCIAGDRGIAPKSGYFVNVNNTWMYTGSGYYY
PEPITENNVVVMSTCAVNYTKAPYVMLN
3D structure
PDB7sb3 Structural mapping of antibody landscapes to human betacoronavirus spike proteins.
ChainA
Resolution3.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 8Z9 A N421 L422 N391 L392
BS02 8Z9 A L375 Y395 L603 L345 Y365 L562
Gene Ontology
Biological Process
GO:0019062 virion attachment to host cell
GO:0019064 fusion of virus membrane with host plasma membrane
GO:0039654 fusion of virus membrane with host endosome membrane
GO:0046718 symbiont entry into host cell
GO:0046813 receptor-mediated virion attachment to host cell
GO:0075509 endocytosis involved in viral entry into host cell
Cellular Component
GO:0016020 membrane
GO:0019031 viral envelope
GO:0020002 host cell plasma membrane
GO:0044173 host cell endoplasmic reticulum-Golgi intermediate compartment membrane
GO:0055036 virion membrane

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Biological Process
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Cellular Component
External links
PDB RCSB:7sb3, PDBe:7sb3, PDBj:7sb3
PDBsum7sb3
PubMed35507649
UniProtA0A0B4N7I3

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