Structure of PDB 7qty Chain A

Receptor sequence
>7qtyA (length=279) Species: 573 (Klebsiella pneumoniae) [Search protein sequence]
GPVKKWECEVISNDNKATFIKELKLRIPEGEVVPFRAGGYIQIECPPHKV
AYADFDVPDEYRSDWDKFNLFRYVSEVKEPTLRAYSMANYPEEKGIIMLN
VRIATPPPKIPDAPPGIMSSYIWSLKPGDKVTISGPFGEFFAKETDAEMV
FIGGGAGMAPMRSHIFDQLKRLHSTRKISFWYGARSLREMFYDEEFEQLA
RDNPNFTFHVALSDPLPEDNWTGHTGFIHNVLYENYLRDHPAPEDCEFYM
CGPPVMNAAVIKMLKDLGVEDENILLDDF
3D structure
PDB7qty Fast fragment- and compound-screening pipeline at the Swiss Light Source.
ChainA
Resolution1.69 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 7.2.1.1: NADH:ubiquinone reductase (Na(+)-transporting).
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FAD A Y166 R209 A210 Y211 S212 N226 A230 T231 P233 A239 P240 G242 I243 M244 S245 F405 Y40 R83 A84 Y85 S86 N100 A104 T105 P107 A113 P114 G116 I117 M118 S119 F279
BS02 F0R A A310 R311 S339 F353 H355 V381 M382 A184 R185 S213 F227 H229 V255 M256
Gene Ontology
Molecular Function
GO:0016491 oxidoreductase activity
GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
GO:0051537 2 iron, 2 sulfur cluster binding
Biological Process
GO:0006814 sodium ion transport
Cellular Component
GO:0016020 membrane

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7qty, PDBe:7qty, PDBj:7qty
PDBsum7qty
PubMed35234147
UniProtA6T526|NQRF_KLEP7 Na(+)-translocating NADH-quinone reductase subunit F (Gene Name=nqrF)

[Back to BioLiP]