Structure of PDB 7prt Chain A

Receptor sequence
>7prtA (length=384) Species: 9606 (Homo sapiens) [Search protein sequence]
FKNSTYSRSSVDVLYTFANCSGLDLIFGLNALLRTADLQWNSSNAQLLLD
YCSSKGYNISWELGNEPNSFLKKADIFINGSQLGEDFIQLHKLLRKSTFK
NAKLYGPDVGQPRRKTAKMLKSFLKAGGEVIDSVTWHHYYLNGRTATRED
FLNPDVLDIFISSVQKVFQVVESTRPGKKVWLGETSSAYGGGAPLLSDTF
AAGFMWLDKLGLSARMGIEVVMRQVFFGAGNYHLVDENFDPLPDYWLSLL
FKKLVGTKVLMASVQGSKRRKLRVYLHCTNTDNPRYKEGDLTLYAINLHN
VTKYLRLPYPFSNKQVDKYLLRPLGPHGLLSKSVQLNGLTLKMVDDQTLP
PLMEKPLRPGSSLGLPAFSYSFFVIRNAKVAACI
3D structure
PDB7prt Mechanism-based heparanase inhibitors reduce cancer metastasis in vivo.
ChainA
Resolution1.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.1.166: heparanase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 FUC A H458 K462 H299 K303
BS02 8I4 A N224 Y298 E343 Y348 G349 G350 Q383 Y391 N65 Y139 E184 Y189 G190 G191 Q224 Y232
BS03 Z61 A G349 G350 G190 G191
Gene Ontology
Molecular Function
GO:0016798 hydrolase activity, acting on glycosyl bonds
Cellular Component
GO:0016020 membrane

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:7prt, PDBe:7prt, PDBj:7prt
PDBsum7prt
PubMed35881786
UniProtQ9Y251|HPSE_HUMAN Heparanase (Gene Name=HPSE)

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