Structure of PDB 7pl3 Chain A

Receptor sequence
>7pl3A (length=273) Species: 171101 (Streptococcus pneumoniae R6) [Search protein sequence]
AAYYQVVPVTANVYDSDGEKLSYISQGSVVWLDKDRKSDDKRLAITISGL
SGYMKTEDLQALDASKDFIPYYESDGHRFYHYVAQNASIPVASHLSDMEV
GKKYYSADGLHFDGFKLENPFLFKDLTEATNYSAEELDKVFSLLNINNSL
LENKGATFKEAEEHYHINALYLLAHSALESNWGRSKIAKDKNNFFGITAY
DTTPYLSAKTFDDVDKGILGATKWIKENYIDRGRTFLGNKASGMNVEYAS
DPYWGEKIASVMMKINEKLGGKD
3D structure
PDB7pl3 Molecular basis of the final step of cell division in Streptococcus pneumoniae.
ChainA
Resolution1.8 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.2.1.96: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 CA A D421 D423 E425 D15 D17 E19
Gene Ontology
Molecular Function
GO:0004040 amidase activity

View graph for
Molecular Function
External links
PDB RCSB:7pl3, PDBe:7pl3, PDBj:7pl3
PDBsum7pl3
PubMed37418323
UniProtP59205|LYTB_STRPN Putative endo-beta-N-acetylglucosaminidase (Gene Name=lytB)

[Back to BioLiP]