Structure of PDB 7or1 Chain A
Receptor sequence
>7or1A (length=596) Species:
9606
(Homo sapiens) [
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KSPLHFAASYGRINTCQRLLQDISDTRLLNEGDLHGMTPLHLAAKNGHDK
VVQLLLKKGALFLSDHNGWTALHHASMGGYTQTMKVILDTNLKCTDRLDE
DGNTALHFAAREGHAKAVALLLSHNADIVLNKQQASFLHLALHNKRKEVV
LTIIRSKRWDECLKIFSHNSPGNKCPITEMIEYLPECMKVLLDFCMLHST
EDKSCRDYYIEYNFKYLQCPLEFTKKTPTQDVIYEPLTALNAMVQNNRIE
LLNHPVCKEYLLMKWLAYGFRAHMMNLGSYCLGLIPMTILVVNIKPGMAF
NSTGIINEEILDTTNSYLIKTCMILVFLSSIFGYCKEAGQINYFMDISNV
LEWIIYTTGIIFVLPLFVEIPAHLQWQCGAIAVYFYWMNFLLYLQRFENC
GIFIVMLEVILKTLLRSTVVFIFLLLAFGLSFYILLNLQDPFSSPLLSII
QTFSMMLGDINYRESFLEPYLRNELAHPVLSFAQLVSFTIFVPIVLMNLL
IGLAVGDIAEVQKHASLKRIAMQVELHTSLEKKLPLWFLRKVDQKSTIVY
PNKPKSLEMEILKQKYRLKDLTFLLEKQHELIKLIIQKMEIISETE
3D structure
PDB
7or1
Cryo-EM structure of the human TRPA1 ion channel in complex with the antagonist 3-60
Chain
A
Resolution
2.64 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
?
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
0IG
A
W711 F716 L850 F853 E854 Q979
W265 F270 L394 F397 E398 Q523
BS02
CA
A
E788 Q791 N805
E337 Q340 N349
BS03
IHP
A
K593 K1046
K147 K563
Gene Ontology
Molecular Function
GO:0005216
monoatomic ion channel activity
GO:0005262
calcium channel activity
GO:0015267
channel activity
GO:0015278
intracellularly gated calcium channel activity
GO:0042802
identical protein binding
GO:0097604
temperature-gated cation channel activity
Biological Process
GO:0006811
monoatomic ion transport
GO:0006816
calcium ion transport
GO:0006874
intracellular calcium ion homeostasis
GO:0007166
cell surface receptor signaling pathway
GO:0009409
response to cold
GO:0009410
response to xenobiotic stimulus
GO:0014070
response to organic cyclic compound
GO:0019233
sensory perception of pain
GO:0019722
calcium-mediated signaling
GO:0042542
response to hydrogen peroxide
GO:0048265
response to pain
GO:0050955
thermoception
GO:0050966
detection of mechanical stimulus involved in sensory perception of pain
GO:0050968
detection of chemical stimulus involved in sensory perception of pain
GO:0050974
detection of mechanical stimulus involved in sensory perception
GO:0051289
protein homotetramerization
GO:0055085
transmembrane transport
GO:0070301
cellular response to hydrogen peroxide
GO:0070588
calcium ion transmembrane transport
Cellular Component
GO:0005886
plasma membrane
GO:0016020
membrane
GO:0032421
stereocilium bundle
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:7or1
,
PDBe:7or1
,
PDBj:7or1
PDBsum
7or1
PubMed
UniProt
O75762
|TRPA1_HUMAN Transient receptor potential cation channel subfamily A member 1 (Gene Name=TRPA1)
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