Structure of PDB 7n9j Chain A

Receptor sequence
>7n9jA (length=276) Species: 10090 (Mus musculus) [Search protein sequence]
PHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPW
MEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGC
DLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSG
AAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTL
RCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPL
GKEQNYTCRVYHEGLPEPLTLRWEPP
3D structure
PDB7n9j Structure of the complex between H2DB and melanoma HSF2 neoantigen YGFRNVVHI
ChainA
Resolution1.74 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A M5 Y7 E63 K66 G69 Q70 W73 V76 S77 N80 L81 Y84 Q97 T143 K146 W147 S150 H155 Y156 Y159 E163 W167 Y171 M4 Y6 E62 K65 G68 Q69 W72 V75 S76 N79 L80 Y83 Q96 T142 K145 W146 S149 H154 Y155 Y158 E162 W166 Y170
External links
PDB RCSB:7n9j, PDBe:7n9j, PDBj:7n9j
PDBsum7n9j
PubMed
UniProtP01899|HA11_MOUSE H-2 class I histocompatibility antigen, D-B alpha chain (Gene Name=H2-D1)

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