Structure of PDB 7n9d Chain A

Receptor sequence
>7n9dA (length=253) Species: 1291540 (Methanomethylophilus alvi) [Search protein sequence]
HMILIKLGGSVITDKSEYHKFNKETVSRLADEIRRSGQDVMVVHGAGSFG
HVIAKKYAIQDGHVDDGQIPAAARAMCDTRELSSMVVEELLAQGIPAVSV
APGSCFVMEDGKLIVDNEEPIRRLADLGIMPVMFGDVVPDRKKGFAIVSG
DQCMEVLCRMFDPEKVVFVSDIDGLYTADPKTDKKARLIGEVTRKKLALT
DITVADVTGGVHSKMEAMLRMTDRNRRCYLVNGNAPNRLYSLLKGETVTC
TVA
3D structure
PDB7n9d Molecular Basis for the Substrate Promiscuity of Isopentenyl Phosphate Kinase from Candidatus methanomethylophilus alvus .
ChainA
Resolution2.1 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.7.4.26: isopentenyl phosphate kinase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ADP A G7 G8 S9 K14 S169 D170 I171 Y175 A177 D178 D202 G211 V212 K215 G8 G9 S10 K15 S170 D171 I172 Y176 A178 D179 D201 G210 V211 K214
BS02 0XI A G44 A45 G49 H50 A74 T78 G134 D135 V136 I146 S148 G149 T209 G45 A46 G50 H51 A75 T79 G135 D136 V137 I147 S149 G150 T208
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0016301 kinase activity
GO:0102043 isopentenyl phosphate kinase activity
Biological Process
GO:0008299 isoprenoid biosynthetic process
GO:0016310 phosphorylation
Cellular Component
GO:0005829 cytosol

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7n9d, PDBe:7n9d, PDBj:7n9d
PDBsum7n9d
PubMed34905349
UniProtM9SEQ1

[Back to BioLiP]