Structure of PDB 7ljm Chain A

Receptor sequence
>7ljmA (length=348) Species: 28901 (Salmonella enterica) [Search protein sequence]
LNSQFNAFLTNIRPTDPQKEDWKGGAKTLRERLNNYEPLKDIVVSTFLQG
SIRRSTAIRPLNGKRPDVDIVVVTNLDHNQIAPQEAMDLFVPFLEKYYPE
KWVPQGRSFGITLSYVELDLVITAIPASGEEKNLLEQLYRSESVLTVNSL
EEQKDWRLNKSWKPSESGNSANIQDAPLSEWKAHPLVLPDRDENKWGRTH
PLAQIRWTAEKNRACNGHYINLVRAVKWWRQQNSDNLPKYPKGYPLEHLI
GNALDDGTPSMGKGLVQLIDTFLSRWAYVYSLRSKPSLPDHGVEEHDVLA
RLSAEDFCLFYEGLEDAAIIARSALASQDPKESAELWRKLFGTKFPFP
3D structure
PDB7ljm Molecular basis of CD-NTase nucleotide selection in CBASS anti-phage defense.
ChainA
Resolution2.6 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.7.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MG A D69 D71 D121 D67 D69 D119
BS02 MG A D69 D71 D67 D69
BS03 GTP A S53 R56 D69 D71 Q210 G249 Y250 D296 S51 R54 D67 D69 Q204 G243 Y244 D290
BS04 GTP A Q51 R109 L194 D196 R197 R204 T205 R307 Q49 R107 L188 D190 R191 R198 T199 R301
Gene Ontology
Molecular Function
GO:0005525 GTP binding
GO:0016779 nucleotidyltransferase activity
GO:0046872 metal ion binding
Biological Process
GO:0009117 nucleotide metabolic process
GO:0051607 defense response to virus

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Molecular Function
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Biological Process
External links
PDB RCSB:7ljm, PDBe:7ljm, PDBj:7ljm
PDBsum7ljm
PubMed34077735
UniProtA0A728KSL7|CDND_SALEB Probable cyclic AMP-AMP-GMP nucleotide synthase (Gene Name=cdnD)

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