Structure of PDB 7kux Chain A
Receptor sequence
>7kuxA (length=742) Species:
3218
(Physcomitrium patens) [
Search protein sequence
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EVKIMVEKDPVKTSFEKWAKPGHFSRTLAKGPNTTTWIWNLHADAHDFDS
HTNDLEEISRKVFSAHFGQLAVIFIWLSGMYFHGARFSNYEAWLSDPTHI
KPSAQVVWPIVGQKILNGDVGGGFQGIQITSGFFQLWRASGITSELQLYT
TAIGGLIFAALMLFAGWFHYHKAAPKLAWFQNVESMLNHHLAGLLGLGSL
AWAGHQVHVSLPINRLLDAGVDPKEIPLPHEFILNRDLLAQLYPSFSKGL
TPFFTLNWSEYSDFLTFRGGLNPVTGGLWLTDTAHHHLAIAVLFLVAGHM
YRTNFGIGHSMKEILEAHKGPFTGEGHKGLYEILTTSWHAQLAINLAMLG
SLTIIVAHHMYAMPPYPYLATDYATQLSLFTHHMWIGGFLVVGAAAHAAI
FMVRDYDPTTQYNNLLDRVLRHRDAIISHLNWVCIFLGFHSFGLYIHNDT
MSALGRPQDMFSDTAIQLQPVFAQWIQNTHALAPSLTAPNATASTSLTWG
GGDLVAVGGKVALLPIPLGTADFLVHHIHAFTIHVTVLILLKGVLFARSS
RLIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNAISVVIFHF
SWKMQSDVWGSISDQGVVTHITGGNFAQSSITINGWLRDFLWAQASQVIQ
SYGSSLSAYGLLFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKV
APAIQPRALSIVQGRAVGVAHYLLGGIATTWAFFLARIISVG
3D structure
PDB
7kux
The structure of the Physcomitrium patens photosystem I reveals a unique Lhca2 paralogue replacing Lhca4.
Chain
A
Resolution
2.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
1.97.1.12
: photosystem I.
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
CL0
A
F458 Y461 I544 Y606 N607 S610 V611 F614 W652 L657 I665 F679 H683 W686 Y738 T745 T746 F749
F442 Y445 I528 Y590 N591 S594 V595 F598 W636 L641 I649 F663 H667 W670 Y722 T729 T730 F733
BS02
CLA
A
F684 A687 F688 L690 M691 Y699 W700 L703
F668 A671 F672 L674 M675 Y683 W684 L687
BS03
CLA
A
F458 I462 W604 Y606 N607 I649 W686 Y738
F442 I446 W588 Y590 N591 I633 W670 Y722
BS04
CLA
A
I54 L57 H58
I38 L41 H42
BS05
CLA
A
W34 H39 F40 A61 H62 F64 G84
W18 H23 F24 A45 H46 F48 G68
BS06
CLA
A
H62 F64 V78 A81 H82 Q85 L86 I89 F90 W354 H355 L358 N361 L362 L365
H46 F48 V62 A65 H66 Q69 L70 I73 F74 W338 H339 L342 N345 L346 L349
BS07
CLA
A
H62 Q85 V88 I89 W92 I402 L406
H46 Q69 V72 I73 W76 I386 L390
BS08
CLA
A
W92 G95 F98 H99 F103 W124
W76 G79 F82 H83 F87 W108
BS09
CLA
A
M96 H99 Q121 I143 I145 S147 A674 Y675 W747
M80 H83 Q105 I127 I129 S131 A658 Y659 W731
BS10
CLA
A
Q121 V122 V123 W124 V127 Q129 L677
Q105 V106 V107 W108 V111 Q113 L661
BS11
CLA
A
I20 V22 F79 F83 A181 F184 H185 W195
I4 V6 F63 F67 A165 F168 H169 W179
BS12
CLA
A
T29 S30 F31 K33 W34 H39 K77 S80 L179 G182 Y186 H187
T13 S14 F15 K17 W18 H23 K61 S64 L163 G166 Y170 H171
BS13
CLA
A
V18 I20 W195 S201 H205 T319
V2 I4 W179 S185 H189 T303
BS14
CLA
A
F79 H82 F83 L86 M178 W195 F196 M202 H205 H206 G209 L210
F63 H66 F67 L70 M162 W179 F180 M186 H189 H190 G193 L194
BS15
CLA
A
G157 I158 Q163 T167 A217 W218 H221 V225 P245
G141 I142 Q147 T151 A201 W202 H205 V209 P229
BS16
CLA
A
L216 G220 V223 H224 I249 R252 F262 L266 Y277 F280 L304
L200 G204 V207 H208 I233 R236 F246 L250 Y261 F264 L288
BS17
CLA
A
Q163 T166 L244 H246 L250
Q147 T150 L228 H230 L234
BS18
CLA
A
W274 L281 H301 L304 A305 V308 N506
W258 L265 H285 L288 A289 V292 N490
BS19
CLA
A
F283 D298 T299 H301 H302 A305 I306 H375 M379 T511
F267 D282 T283 H285 H286 A289 I290 H359 M363 T495
BS20
CLA
A
L211 G214 S215 W218 Q222 T299 H302 H303 I306 F310 L368 I371 V372 P381 Y382
L195 G198 S199 W202 Q206 T283 H286 H287 I290 F294 L352 I355 V356 P365 Y366
BS21
CLA
A
N204 H205 L213 L311 H315 T319 F321 I323
N188 H189 L197 L295 H299 T303 F305 I307
BS22
CLA
A
L203 L207 F310 A313 M316 Y317 I330 M364 L432
L187 L191 F294 A297 M300 Y301 I314 M348 L416
BS23
CLA
A
V312 M316 G324 H325
V296 M300 G308 H309
BS24
CLA
A
E329 I330 A333 H334
E313 I314 A317 H318
BS25
CLA
A
H334 H343 L346 L431
H318 H327 L330 L415
BS26
CLA
A
I370 I371 H374 V407 I549 T552 V553
I354 I355 H358 V391 I533 T536 V537
BS27
CLA
A
M364 H374 H375 A378 M379 T511 W515
M348 H358 H359 A362 M363 T495 W499
BS28
CLA
A
W92 S147 T397 H398 W401 I402 I743 W747
W76 S131 T381 H382 W385 I386 I727 W731
BS29
CLA
A
W92 S147 G148 F149 L152 L211 L365 T369 V372 M376 Y382 L395 H398 H399 I402
W76 S131 G132 F133 L136 L195 L349 T353 V356 M360 Y366 L379 H382 H383 I386
BS30
CLA
A
H58 A59 H62 D63 H355 L358 L362 F405 G409 A412 H413 I416 R420 F577 R578 W595 L602
H42 A43 H46 D47 H339 L342 L346 F389 G393 A396 H397 I400 R404 F561 R562 W579 L586
BS31
CLA
A
H445 W448
H429 W432
BS32
CLA
A
W448 F452 F455 H456
W432 F436 F439 H440
BS33
CLA
A
F455 G459 L460 I462 H463 M467 R472 D475 F477
F439 G443 L444 I446 H447 M451 R456 D459 F461
BS34
CLA
A
I492 H496 T503 A504 T511
I476 H480 T487 A488 T495
BS35
CLA
A
F283 T503 P505 N506
F267 T487 P489 N490
BS36
CLA
A
H374 Y377 A489 I492 Q493 W515 L534 H542 H545 I549 V612 H615
H358 Y361 A473 I476 Q477 W499 L518 H526 H529 I533 V596 H599
BS37
CLA
A
W448 F452 L453 P486 V487 F488 A489 F539 H542 H543 A546 H550
W432 F436 L437 P470 V471 F472 A473 F523 H526 H527 A530 H534
BS38
CLA
A
L446 V449 I549 H550
L430 V433 I533 H534
BS39
CLA
A
W55 F684 F688 F692 L725 V733 H737 L740
W39 F668 F672 F676 L709 V717 H721 L724
BS40
CLA
A
P337 F338
P321 F322
BS41
PQN
A
M691 F692 S695 G696 R697 W700 A724 L725
M675 F676 S679 G680 R681 W684 A708 L709
BS42
SF4
A
C581 G583 C590
C565 G567 C574
BS43
CLA
A
F338 T339 R434 V435 H438 I442 H445
F322 T323 R418 V419 H422 I426 H429
BS44
CLA
A
V199 M202 L203 H206 M327 Y347 L350 T351 S353 W354 Q357 I360 N361 M364 L365
V183 M186 L187 H190 M311 Y331 L334 T335 S337 W338 Q341 I344 N345 M348 L349
BS45
CLA
A
I707 A710 H711 V716
I691 A694 H695 V700
BS46
CLA
A
T51 I54 W55 I707 H711 P718 P722
T35 I38 W39 I691 H695 P702 P706
BS47
CLA
A
N447 I451 G454 F455 F547 V551 L554 I555 L600 F603 W604
N431 I435 G438 F439 F531 V535 L538 I539 L584 F587 W588
BS48
CLA
A
L680 G681 H683 F684 A687
L664 G665 H667 F668 A671
BS49
CLA
A
L653 L657 W658
L637 L641 W642
BS50
CLA
A
A469 L470
A453 L454
BS51
CLA
A
W448 I451
W432 I435
Gene Ontology
Molecular Function
GO:0000287
magnesium ion binding
GO:0009055
electron transfer activity
GO:0016168
chlorophyll binding
GO:0016491
oxidoreductase activity
GO:0046872
metal ion binding
GO:0051539
4 iron, 4 sulfur cluster binding
Biological Process
GO:0015979
photosynthesis
Cellular Component
GO:0009507
chloroplast
GO:0009522
photosystem I
GO:0009535
chloroplast thylakoid membrane
GO:0009579
thylakoid
GO:0016020
membrane
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:7kux
,
PDBe:7kux
,
PDBj:7kux
PDBsum
7kux
PubMed
35190662
UniProt
Q8MFA3
|PSAA_PHYPA Photosystem I P700 chlorophyll a apoprotein A1 (Gene Name=psaA)
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