Structure of PDB 7fj3 Chain A

Receptor sequence
>7fj3A (length=1308) Species: 10345 (Suid alphaherpesvirus 1) [Search protein sequence]
MERPAILPSGQILSNIEVHSHRALFDIFKRFRSDDNNLYGAEFDALLGTY
CSTLSLVRFLELGLSVACVCTKFPELSYVAEGTIQFEVQQPMIARDGPHP
ADQPVHNYMIKRLDRRSLNAAFSIAVEALGLISGENLDGTHISSAMRLRA
IQQLARNVQAVLDSFERGTADQMLRVLMEKAPPLSLLAPFTLYEGRLADR
VACAALVSELKRRVRDDTFFLTKHERNKDAVLDRLSDLVNCTAPSVAVAR
MTHADTQGRPVDGVLVTTAGVRQRLLHHVLTLADTHADVPVTYGEMVIAN
TNLVTALVMGKAVSNMDDVARYLLGGVGSARVRADLVVVGDRLVFLEALE
KRVYQATQVPYPLVGNLDVTFVMPLGVFKPAADRYARHAGSFAPTPGLPD
PRTHPPRAVHFFNKDGVPCHVTFEHAMGTLCHPSFLDVDATLAALRQEPA
EVQCAFGAYVADARPDALVGLMQRFLEEWPGMMPVRPRWAAPAAADQLLA
PGNADLRLELHPAFDFFVAPEVDVPGPFAVPQVMGQVRAMPRIINGNIPL
ALCPVDFRDARGFELSVDRHRLAPATVAAVRGAFRDANYPMVFYIIEAVI
HGSERTFCALARLVAQCIQSYWRNTHNAAFVNNFYMVMYINTYLGNGELP
EDCAAVYKDLLEHVHALRRLIGEFTLPGDPLGNQPQEELNHALADATLLP
PLIWDCDPILYRDGLAERLPELRVNGAHFQHILWVEMAQVNFRNVGGGLV
HNRPVRNENQPLHPHHDAEWSVLSKIYYYAVVPAFSRGNCCTMGVRYDRV
YQLVQTMVVPETDEEVGTDDPRHPLHPRNLVPNSLNVLFHNACVAVDADA
MLILQETVTNMAERTTPLLASVAPDAGMATVATRDMRTHDGSLHHGLLMM
AYQPNDATLLEGAFFYPAPVNALFACADHLGAMRDVGAEVRAAAQHVPCV
PHFLGANYYATVRQPVAQHAAQSRADENTLSYALMAGYFKMSPVAFTHQL
RRQLHPGFALTVVRQDRFATENVLFAEKASESYFMGQMQVARTESGGGLH
LQLTQPRANVDLGVGFTAAYAAAALRAPVTDMGNLPQNLFATRGAPPMLD
ADADDYLRRTVNAGNRLAPVPVFGQMLPQVPAGLARGQQSVCEFIATPVS
VDLAYFRRACNPRGRAAGEVHGEEGLMFDHSHADPAHPHRATANPWASQR
HSYADRLYNGQYNMSGPAYSPCFKFFTPARGLARLIADTGAAASPTSNGE
YQFKRPVGAGELVEDPCALFQEAYPPLCASDSALLRTPLGAEEHFAQYLI
RDESPLKG
3D structure
PDB7fj3 Structures of pseudorabies virus capsids.
ChainA
Resolution4.53 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A I132 S133 R147 I132 S133 R147
BS02 peptide A V158 Q159 A160 V161 L162 D163 S164 V1049 L1060 L1062 V158 Q159 A160 V161 L162 D163 S164 V1040 L1051 L1053
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Cellular Component
GO:0019028 viral capsid
GO:0039622 T=16 icosahedral viral capsid

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Molecular Function
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Cellular Component
External links
PDB RCSB:7fj3, PDBe:7fj3, PDBj:7fj3
PDBsum7fj3
PubMed35318331
UniProtG3G8T2

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