Structure of PDB 7fi3 Chain A

Receptor sequence
>7fi3A (length=724) Species: 69014 (Thermococcus kodakarensis KOD1) [Search protein sequence]
SVLKTVIYSSSGALFMGVWNPSSSGYSDTYSRRIADLVFDSGIPYGIDGV
PHPYHCHVVDYKSDVTVPEDAVIFNSTTDTWVAAHAGETAKTYARIECDR
PYFHDGHKLSAADVMYSLAWSWEWTTQDGDDDPYYDASEADWSGEYMNTI
LGIKLVEQTDDRMVFDVYHNHYFPASEIMTAAYVVPFTGTPWQLWYAMSE
LVAHNPKYSWSESSEDVEQLDQINPSHAQAIKEKLLELKQSKPIPEFLKP
YIEDENAATAAYDSIAKFMDEHNHAVIGQGPYYVDEYQPENLFVRIKKFD
KWTIPAFAEPEYQVDPYYKTIEVYGIQNEDTAILEVANGHYDILWYPFAA
YRFTGLSDEQRANIKLYRSTSAFGDIVWNPVHDQDNPYVITVGDKKYFNP
FAVRKVRFAIQYMVNRAYITQNIFQGSAGPMFTPWTSTETGFEYVRPVVD
AFGLTEQSDEDLAMKLFEEGMQEAAQELAKMGYELKKGDDGKWYFNGEPV
KVVGLGRVEDERKDVATYIVEEVMKKLGFDAEAKIVDRRTASGTVYTSDP
SSYQWNFYTEGWVSSSNVKFSTTRIIQYYSSYWYAPGLVGWKWTPENTQR
VTMEEVLKFLGNGDIQAGLDSLGLSYYNTVDKIQPLLNWTADDFALVIYS
GEANGVKMDSEDKYWDFNRLGTAIGIYEGYRTFLYENWEFYAASKDIEIK
LVDPVAGLASDWAIRSARPVVEHH
3D structure
PDB7fi3 Structural basis for peptide recognition by archaeal oligopeptide permease A.
ChainA
Resolution2.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 peptide A M49 S60 D61 T62 R540 R545 G594 W595 V596 Q610 M16 S27 D28 T29 R507 R512 G561 W562 V563 Q577
External links