Structure of PDB 7ekd Chain A

Receptor sequence
>7ekdA (length=343) Species: 39947 (Oryza sativa Japonica Group) [Search protein sequence]
CFDFRAARRVPETHAWPGLDDHPVVDGGGGGGEDAVPVVDVGAGDAAARV
ARAAEQWGAFLLVGHGVPAALLSRVEERVARVFSLPASEKMRAVRGPGEP
CGYGSPPISSFFSKLMWSEGYTFSPSSLRSELRRLWPKSGDDYLLFCDVM
EEFHKEMRRLADELLRLFLRALGLTGEEVAGVEAERRIGERMTATVHLNW
YPRCPEPRRALGLIAHTDSGFFTFVLQSLVPGLQLFRRGPDRWVAVPAVA
GAFVVNVGDLFHILTNGRFHSVYHRAVVNRDRDRVSLGYFLGPPPDAEVA
PLPEAVPAGRSPAYRAVTWPEYMAVRKKAFATGGSALKMVSTD
3D structure
PDB7ekd Evolutionary alterations in gene expression and enzymatic activities of gibberellin 3-oxidase 1 in Oryza.
ChainA
Resolution1.899 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.14.11.15: gibberellin 3beta-dioxygenase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 AKG A Y212 L224 H227 L244 H285 R295 S297 F301 Y201 L213 H216 L233 H274 R284 S286 F290
BS02 J5X A P117 P118 I119 T206 D229 S230 P106 P107 I108 T195 D218 S219
Gene Ontology
Molecular Function
GO:0016707 gibberellin 3-beta-dioxygenase activity
GO:0046872 metal ion binding
GO:0051213 dioxygenase activity
Biological Process
GO:0009416 response to light stimulus
GO:0009685 gibberellin metabolic process
GO:0009686 gibberellin biosynthetic process

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Molecular Function
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Biological Process
External links
PDB RCSB:7ekd, PDBe:7ekd, PDBj:7ekd
PDBsum7ekd
PubMed35046494
UniProtQ9FU53|G3OX2_ORYSJ Gibberellin 3-beta-dioxygenase 2 (Gene Name=GA3OX2)

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