Structure of PDB 7dyu Chain A

Receptor sequence
>7dyuA (length=228) Species: 9606 (Homo sapiens) [Search protein sequence]
STVPRLHRPSLQHFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAG
CRTVPVEVGWSQTLMTVNEFISKYIVNEPRDVGYLAQHQLFDQIPELKQD
ISIPDYCSLGDGEEEEITINAWFGPQGTISPLHQDPQQNFLVQVMGRKYI
RLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKAPFLSCILSP
GEILFIPVKYWHYVRALDLSFSVSFWWS
3D structure
PDB7dyu 5-Substituted Pyridine-2,4-dicarboxylate Derivatives Have Potential for Selective Inhibition of Human Jumonji-C Domain-Containing Protein 5.
ChainA
Resolution1.72 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.14.11.73: [protein]-arginine 3-hydroxylase.
3.4.-.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MN A H321 D323 H400 H133 D135 H212
BS02 HR9 A E238 G240 Y272 W310 I317 S318 H321 N327 K336 H400 V402 W414 E57 G59 Y84 W122 I129 S130 H133 N139 K148 H212 V214 W226
External links
PDB RCSB:7dyu, PDBe:7dyu, PDBj:7dyu
PDBsum7dyu
PubMed37527664
UniProtQ8N371|KDM8_HUMAN Bifunctional peptidase and arginyl-hydroxylase JMJD5 (Gene Name=KDM8)

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