Structure of PDB 7dyi Chain A

Receptor sequence
>7dyiA (length=456) Species: 1140 (Synechococcus elongatus PCC 7942 = FACHB-805) [Search protein sequence]
AIAKMRTMIEGFDDISHGGLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIE
FDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEGKLFILDASLSALIER
INYAIQKYRARRVSIDSVTSVFQQSSVVRRELFRLVARLKQIGATTVMTT
ERIEEYGPIARYGVEEFVSDNVVILRNVLEGERRRRTLEILKLRGTSHMK
GEYPFTITDHGINIFPRSSNVRVSSGVVRLDEMCGGGFFKDSIILATGAT
GTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEMER
QNLLKIVCAYPESAGLEDHLQIIKSEINDFKPARIAIDSLSALARGVSNN
AFRQFVIGVTGYAKQEEITGLFTNTSDQFMGAHSITDSHISEITDTIILL
QYVEIRGEMSRAINVFKMRGSWHDKAIREFMISDKGPDIKDSFRNFERII
SGSPTR
3D structure
PDB7dyi Elucidation of master allostery essential for circadian clock oscillation in cyanobacteria.
ChainA
Resolution2.64 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.7.11.1: non-specific serine/threonine protein kinase.
3.6.4.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ATP A S48 T50 G51 K52 T53 L54 F90 I239 S32 T34 G35 K36 T37 L38 F74 I207
BS02 ATP A T290 G291 T292 G293 K294 T295 W331 R451 I472 T250 G251 T252 G253 K254 T255 W291 R411 I432
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0003677 DNA binding
GO:0004674 protein serine/threonine kinase activity
GO:0004712 protein serine/threonine/tyrosine kinase activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0016787 hydrolase activity
GO:0016887 ATP hydrolysis activity
GO:0042802 identical protein binding
GO:0044024 histone H2AS1 kinase activity
GO:0046872 metal ion binding
GO:0106310 protein serine kinase activity
Biological Process
GO:0006338 chromatin remodeling
GO:0006355 regulation of DNA-templated transcription
GO:0007623 circadian rhythm
GO:0009649 entrainment of circadian clock
GO:0016310 phosphorylation
GO:0042752 regulation of circadian rhythm
GO:0042754 negative regulation of circadian rhythm
GO:0048511 rhythmic process
GO:0070297 regulation of phosphorelay signal transduction system

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:7dyi, PDBe:7dyi, PDBj:7dyi
PDBsum7dyi
PubMed35427168
UniProtQ79PF4|KAIC_SYNE7 Circadian clock oscillator protein KaiC (Gene Name=kaiC)

[Back to BioLiP]