Structure of PDB 7dwq Chain A
Receptor sequence
>7dwqA (length=726) Species:
329726
(Acaryochloris marina MBIC11017) [
Search protein sequence
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VAGKPGHFNKSLSKGPQTTTWIWNLHALAHDFDTQTNDLEEISRKIFSAH
FGHLSIIFVWISGMIFHAARFSNYYAWLADPLGNKPSAHVVWPIVGQDIL
NADVGNGFRGVQITSGLFHILRGAGMTDPGELYSAAIGALVAAVVMMYAG
YYHYHKKAPKLEWFQNAESTMTHHLIVLLGLGNLAWTGHLIHVSLPVNKL
LDSGVAPQDIPIPHEFLFDNGFMADLYPSFAQGLMPYFTLNWGAYSDFLT
FKGGLDPTTGGLWMTDIAHHHLALAVMYIIAGHMYRTNWGIGHSMKEIME
SHKGPFTGEGHKGLYEVLTTSWHAQLAINLATWGSFSIIVAHHMYAMPPY
PYLATDYGTQLNLFVHHMWIGGFLIVGGAAHAAIFMVRDYDPAVNQNNVL
DRMLRHRDTIISHLNWVCIFLGFHSFGLYIHNDNMRSLGRPQDMFSDTAI
QLQPIFSQWVQNLQANVAGTIRAPLAEGASSLAWGGDPLFVGGKVAMQHV
SLGTADFMIHHIHAFQIHVTVLILIKGVLYARSSRLIPDKANLGFRFPCD
GPGRGGTCQSSGWDHIFLGLFWMYNCISIVNFHFFWKMQSDVWGAANANG
GVNYLTAGNWAQSSITINGWLRDFLWAQSVQVINSYGSALSAYGILFLGA
HFIWAFSLMFLFSGRGYWQELIESIVWAHSKLKIAPAIQPRAMSITQGRA
VGLGHYLLGGIVTSWSFYLARILALG
3D structure
PDB
7dwq
A unique photosystem I reaction center from a chlorophyll d-containing cyanobacterium Acaryochloris marina.
Chain
A
Resolution
3.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number
1.97.1.12
: photosystem I.
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
CL7
A
F453 I457 F542 W599 N602 I644 Y733
F426 I430 F515 W572 N575 I617 Y706
BS02
CL7
A
P32 I49 H53
P5 I22 H26
BS03
CL7
A
F35 A56 H57 Q62
F8 A29 H30 Q35
BS04
CL7
A
H57 I73 A76 H77 H80 W349 L353 N356
H30 I46 A49 H50 H53 W322 L326 N329
BS05
CL7
A
H80 W87 W360
H53 W60 W333
BS06
CL7
A
G90 F93 H94 F98 W119
G63 F66 H67 F71 W92
BS07
CL7
A
M91 H116 I140 S142
M64 H89 I113 S115
BS08
CL7
A
V118 W119 Q124 L127 A669
V91 W92 Q97 L100 A642
BS09
CL7
A
A29 H34 K72 S75 M174 G177 Y178 Y181 H182
A2 H7 K45 S48 M147 G150 Y151 Y154 H155
BS10
CL7
A
W190 S196 H200 V204 N315 W316
W163 S169 H173 V177 N288 W289
BS11
CL7
A
F74 H77 F78 L81 W190 F191 T197 H200 H201 V204 L205
F47 H50 F51 L54 W163 F164 T170 H173 H174 V177 L178
BS12
CL7
A
E158 S161 A162 H216 P240
E131 S134 A135 H189 P213
BS13
CL7
A
G215 I218 H219 N247 F257 G260
G188 I191 H192 N220 F230 G233
BS14
CL7
A
S161 H241
S134 H214
BS15
CL7
A
W269 G270 Y272 L276 T277 H296 L299 A300 V303 L502
W242 G243 Y245 L249 T250 H269 L272 A273 V276 L475
BS16
CL7
A
F278 L289 D293 I294 H297 H370 M374
F251 L262 D266 I267 H270 H343 M347
BS17
CL7
A
G209 N210 W213 I294 H297 H298 L301 F363 V367 P376 Y377
G182 N183 W186 I267 H270 H271 L274 F336 V340 P349 Y350
BS18
CL7
A
H310 T314 W316
H283 T287 W289
BS19
CL7
A
M198 Y312
M171 Y285
BS20
CL7
A
M311 G319 H320
M284 G292 H293
BS21
CL7
A
I325 S328 H329
I298 S301 H302
BS22
CL7
A
M326 H338 V426
M299 H311 V399
BS23
CL7
A
A194 T197 L345 T346 W349 Q352 I355 N356 W360
A167 T170 L318 T319 W322 Q325 I328 N329 W333
BS24
CL7
A
H369 I402 V548
H342 I375 V521
BS25
CL7
A
F363 I366 H370 M374 S507 W511
F336 I339 H343 M347 S480 W484
BS26
CL7
A
W87 S142 N389 H393 W396 W742
W60 S115 N362 H366 W369 W715
BS27
CL7
A
W87 G143 I147 W360 S364 V367 M371 Y377 L390 H394 I397
W60 G116 I120 W333 S337 V340 M344 Y350 L363 H367 I370
BS28
CL7
A
A54 D58 L357 G404 H408 R415 R573 W590
A27 D31 L330 G377 H381 R388 R546 W563
BS29
CL7
A
F333 T334 R429 M430 H433 I437 H440
F306 T307 R402 M403 H406 I410 H413
BS30
CL7
A
T436 H440 W443
T409 H413 W416
BS31
CL7
A
W443 F447 F450 H451
W416 F420 F423 H424
BS32
CL7
A
F450 G454 L455 H458 D470 F472
F423 G427 L428 H431 D443 F445
BS33
CL7
A
H369 F483 S484 Q488 W511 V527 H537 H540 V607 H610 K614
H342 F456 S457 Q461 W484 V500 H510 H513 V580 H583 K587
BS34
CL7
A
F447 L448 P481 F483 S484 F534 H537 H538 A541
F420 L421 P454 F456 S457 F507 H510 H511 A514
BS35
CL7
A
L441 V444 I544 H545
L414 V417 I517 H518
BS36
CL7
A
I702 H706 I711
I675 H679 I684
BS37
CL7
A
T46 I49 W50 P713 P717
T19 I22 W23 P686 P690
BS38
CL7
A
I680 F683 A727 V728 H732 L735
I653 F656 A700 V701 H705 L708
BS39
CL7
A
H329 K330 P332 F333
H302 K303 P305 F306
BS40
PQN
A
M686 F687 R692 W695 A719 M720
M659 F660 R665 W668 A692 M693
BS41
SF4
A
C576 G578 P579 C585
C549 G551 P552 C558
BS42
G9R
A
Q543 Y601 N602 F609 W647 F674 H678 W681 T740 S741 F744
Q516 Y574 N575 F582 W620 F647 H651 W654 T713 S714 F717
BS43
PHO
A
A682 F683 M686 Y694 W695 L698
A655 F656 M659 Y667 W668 L671
BS44
8CT
A
A351 I355 F412
A324 I328 F385
BS45
8CT
A
S362 L551
S335 L524
BS46
8CT
A
F679 I680 W742
F652 I653 W715
BS47
CL7
A
I672 F679 A682
I645 F652 A655
BS48
CL7
A
S464 L465
S437 L438
BS49
PHO
A
G449 F542 I550 F598 W599
G422 F515 I523 F571 W572
Gene Ontology
Molecular Function
GO:0000287
magnesium ion binding
GO:0009055
electron transfer activity
GO:0016168
chlorophyll binding
GO:0016491
oxidoreductase activity
GO:0046872
metal ion binding
GO:0051539
4 iron, 4 sulfur cluster binding
Biological Process
GO:0015979
photosynthesis
Cellular Component
GO:0009522
photosystem I
GO:0009579
thylakoid
GO:0016020
membrane
GO:0031676
plasma membrane-derived thylakoid membrane
GO:0042651
thylakoid membrane
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:7dwq
,
PDBe:7dwq
,
PDBj:7dwq
PDBsum
7dwq
PubMed
34002536
UniProt
B0C474
|PSAA_ACAM1 Photosystem I P700 chlorophyll a apoprotein A1 (Gene Name=psaA)
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