Structure of PDB 7dk8 Chain A

Receptor sequence
>7dk8A (length=558) Species: 39946 (Oryza sativa Indica Group) [Search protein sequence]
EKLRFIDEMTTNVDAVQERVLGEILGRNAGTEYLTKCGLDGATDRAAFRA
KVPVVSYDDLQPYIQRIANGDRSPILSTHPVSEFLTSSGTSAGERKLMPT
IMDELDRRQLLYSLLMPVMNLYVPGLDKGKGLYFLFVKSETKTPGGLTAR
PVLTSYYKSDHFKNRPDPYHNYTSPTAAILCADAFQSMYAQMVCGLCQRN
DVLRLGAVFASGLLRAIRFLQLNWEQLADDIESGELTPRVTDPSVREAVA
AILLPDPELAKLIRAECSKGDWAGIITRVWPNTKYLDVIVTGAMAQYIPT
LEFYSGGLPMACTMYASSECYFGLNLRPMCDPSEVSYTIMPNMGYFEFLP
VDATQLVDLARVEVGREYELVITTYAGLNRYRVGDVLRVTGFHNAAPQFR
FVRRKNVLLSIESDKTDEAELQRAVERASALLRPHGASVVEYTSQACTKR
IPGHYVIYWELLTVVDADTLGRCCLEMEEALNTVYRQSRVADGSIGPLEI
RVVRPGTFEELMDYAISRGASINQYKVPRCVTFPPIVELLDSRVVSSHFS
PALPHWTP
3D structure
PDB7dk8 Crystal structure of the acyl acid amido synthetase GH3-8 from Oryza sativa.
ChainA
Resolution1.99 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 6.3.2.-
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 AMP A S110 I312 M337 A339 S340 S341 Y360 D416 F432 R435 S88 I289 M314 A316 S317 S318 Y337 D385 F401 R404
Gene Ontology
Molecular Function
GO:0010279 indole-3-acetic acid amido synthetase activity
GO:0016208 AMP binding
GO:0016874 ligase activity
GO:0016881 acid-amino acid ligase activity
Biological Process
GO:0006952 defense response
GO:0009555 pollen development
GO:0009851 auxin biosynthetic process
GO:0140964 intracellular auxin homeostasis
GO:1900424 regulation of defense response to bacterium
Cellular Component
GO:0005737 cytoplasm

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:7dk8, PDBe:7dk8, PDBj:7dk8
PDBsum7dk8
PubMed33272567
UniProtA3BLS0|GH38_ORYSI Indole-3-acetic acid-amido synthetase GH3.8 (Gene Name=GH3.8)

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