Structure of PDB 7d4e Chain A

Receptor sequence

>7d4eA (length=578) Species: 5547 (Trichoderma viride) [Search protein sequence]

DFAESVRTRWARRLIREKVAKELNILTEGGYSHDNLPSDPLYSSIEEELP
PRKVCIVGAGVSGLYIAMILDDLKIPNLTYDIFESSSRTGGRLYTHHFTD
AKHDYYDIGAMRYPDIPSMKRTFNLFKRTGMPLIKYYLDGENTPQLYNNH
FFAKGVVDPYMVSVANGGTVPDDVVDSVGEKLQQAFGYYKEKLAEDFDKG
FDELMLVDDMTTREYLKRGGPKGEAPKYDFFAIQWMETQNTGTNLFDQAF
SESVIDSFDFDNPTKPEWYCIEGGTSLLVDAMKETLVHKVQNNKRVEAIS
IDLDAPDDGNMSVKIGGKDYSGYSTVFNTTALGCLDRMDLRGLNLHPTQA
DAIRCLHYDNSTKVALKFSYPWWIKDCGITCGGAASTDLPLRTCVYPSYN
LGDTGEAVLLASYTWSQDATRIGSLVKDAPPQPPKEDELVELILQNLARL
HAEHMTYEKIKEAYTGVYHAYCWANDPNVGGAFALFGPGQFSNLYPYLMR
PAAGGKFHIVGEASSVHHAWIIGSLESAYTAVYQFLYKYKMWDYLRLLLE
RWQYGLQELETGKHGTAHLQFILGSLPK

3D structure

PDB

7d4e Structural basis of enzyme activity regulation by the propeptide of l-lysine alpha-oxidase precursor from Trichoderma viride .

Chain

Resolution

1.85 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	FAD	A	G91 G93 V94 S95 E117 S118 G124 R125 G142 A143 M144 R145 Y146 R328 V329 T363 C367 S394 W506 N511 A515 E545 W553 I554 S557	G58 G60 V61 S62 E84 S85 G91 R92 G109 A110 M111 R112 Y113 R295 V296 T330 C334 S361 W473 N478 A482 E512 W520 I521 S524
BS02	LYS	A	R145 T276 W448 F516 W553	R112 T243 W415 F483 W520

Gene Ontology

	Molecular Function
GO:0000166	nucleotide binding
GO:0001716	L-amino-acid oxidase activity
GO:0016491	oxidoreductase activity

	Biological Process
GO:0009063	amino acid catabolic process

View graph for
Molecular Function

View graph for
Biological Process

External links

PDB	RCSB:7d4e, PDBe:7d4e, PDBj:7d4e
PDBsum	7d4e
PubMed	33554108
UniProt	A0A0G4DCU0

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