Structure of PDB 7d0v Chain A

Receptor sequence
>7d0vA (length=526) Species: 8656 (Naja atra) [Search protein sequence]
GSFKLTILHTNDVHARLEQTSRDSGKCSGEDCYGGVARRATKIRQIRASH
RNVLLLDAGDQYQGTIWFNYFKGREVVHFMNSLRYDAMALGNHEFDNGLN
GLLDPLLKNVKFPILSANIRPKGPIASKISGYILPYKIINVGSEKVGIIG
YTTKETPVLSNPGPYLEFRDEVEELQKHADKLTTLGVNKIIALGHSGFME
DCRIAQKVKGVDVVVGGHTNTFLYTGSPPSNEVAAGNYPFMQLSDDGRQV
PVVQAYAFGKYLGYLNVIFDDKGKVIKASGNPILLNKSIQEDPAVKAEIS
RMKVQLQNYSSQEIGRTIVYLNGTTHACRFHECNLGNLICDAVVYNNLRH
PDDNEWNHVSMCIVNGGGIRSPIDEQANNGIITLEELTAVLPFGGTFDLL
QIKGSTLRQAFEHSVHRHGQGTGELLQVSGIKVVYDLSQKPGKRVVSLNV
LCTECRVPTYVPLEMEKTYKVLLPSFLAAGGDGYYMLKGDSSNHSSGDLD
ISIVGNYIKRMGKVFPAMEGRMVFSA
3D structure
PDB7d0v Crystal structure of Taiwan cobra 5'-nucleotidase
ChainA
Resolution2.175 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.1.3.5: 5'-nucleotidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FUC A Y95 Y334 Y70 Y309
BS02 ZN A D37 H39 D85 D12 H14 D60
BS03 ZN A D85 N117 H220 H243 D60 N92 H195 H218
BS04 CA A N213 D237 G298 N188 D212 G273
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0016787 hydrolase activity
GO:0016788 hydrolase activity, acting on ester bonds
GO:0046872 metal ion binding
Biological Process
GO:0009166 nucleotide catabolic process

View graph for
Molecular Function
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Biological Process
External links
PDB RCSB:7d0v, PDBe:7d0v, PDBj:7d0v
PDBsum7d0v
PubMed
UniProtA0A2I4HXH5|V5NTD_NAJAT Snake venom 5'-nucleotidase (Fragment)

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