Structure of PDB 7d0j Chain A

Receptor sequence
>7d0jA (length=740) Species: 3055 (Chlamydomonas reinhardtii) [Search protein sequence]
KVKIAVDRNPVETSFEKWAKPGHFSRTLSKGPNTTTWIWNLHADAHDFDS
HTSDLEEISRKVFSAHFGQLGIIFIWLSGMYFHGARFSNYEAWLSDPTHI
KPSAQVVWPIVGQEILNGDVGGGFQGIQITSGFFQLWRASGITSELQLYT
TAIGGLVMAAAMFFAGWFHYHKAAPKLEWFQNVESMLNHHLGGLLGLGSL
AWAGHQIHVSLPVNKLLDAGVDPKEIPLPHDLLLNRAIMADLYPSFAKGI
APFFTLNWSEYSDFLTFKGGLNPVTGGLWLSDTAHHHVAIAVLFLVAGHM
YRTNWGIGHSMKEILEAHRGPFTGEGHVGLYEILTTSWHAQLAINLALFG
SLSIIVAHHMYAMPPYPYLATDYGTQLSLFTHHTWIGGFCIVGAGAHAAI
FMVRDYDPTNNYNNLLDRVIRHRDAIISHLNWVCIFLGFHSFGLYIHNDT
MSALGRPQDMFSDTAIQLQPVFAQWIQNTHFLAPQLTAPNALAATSLTWG
GDLVAVGGKVAMMPISLGTSDFMVHHIHAFTIHVTVLILLKGVLFARSSR
LIPDKANLGFRFPCDGPGRGGTCQVSAWDHVFLGLFWMYNSLSIVIFHFS
WKMQSDVWGTVTASGVSHITGGNFAQSANTINGWLRDFLWAQSSQVIQSY
GSALSAYGLIFLGAHFVWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAP
AIQPRALSITQGRAVGVAHYLLGGIATTWSFFLARIISVG
3D structure
PDB7d0j Structure of photosystem I-LHCI-LHCII from the green alga Chlamydomonas reinhardtii in State 2.
ChainA
Resolution3.42 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.97.1.12: photosystem I.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CLA A I605 F608 L650 H676 W679 Y731 T739 F742 I594 F597 L639 H665 W668 Y720 T728 F731
BS02 CLA A F677 A680 F681 M684 Y692 W693 F666 A669 F670 M673 Y681 W682
BS03 CLA A F453 I457 F541 W598 N601 Y731 F442 I446 F530 W587 N590 Y720
BS04 CLA A H34 A56 H57 H23 A45 H46
BS05 CLA A H57 F59 V73 H77 Q80 I84 F85 W349 H350 N356 H46 F48 V62 H66 Q69 I73 F74 W338 H339 N345
BS06 CLA A H57 Q80 F360 H46 Q69 F349
BS07 CLA A G90 F93 H94 F98 W119 G79 F82 H83 F87 W108
BS08 CLA A M91 Q116 I140 S142 Y668 M80 Q105 I129 S131 Y657
BS09 CLA A V118 Q124 V107 Q113
BS10 CLA A I15 F78 M173 A176 F179 H180 W190 I4 F67 M162 A165 F168 H169 W179
BS11 CLA A T24 F26 W29 H34 K72 G177 W178 Y181 H182 T13 F15 W18 H23 K61 G166 W167 Y170 H171
BS12 CLA A V13 I15 W190 H200 V2 I4 W179 H189
BS13 CLA A H77 F78 M173 W190 M197 H200 H201 H66 F67 M162 W179 M186 H189 H190
BS14 CLA A G152 Q158 T162 A212 W213 H216 P240 G141 Q147 T151 A201 W202 H205 P229
BS15 CLA A L211 G215 I218 H219 G260 I261 L200 G204 I207 H208 G249 I250
BS16 CLA A W269 L276 H296 V299 A300 V303 W258 L265 H285 V288 A289 V292
BS17 CLA A F278 H297 H370 M374 F267 H286 H359 M363
BS18 CLA A L206 W213 Q217 H297 H298 V367 M371 P376 Y377 L195 W202 Q206 H286 H287 V356 M360 P365 Y366
BS19 CLA A H200 G203 G204 H310 T314 I318 H189 G192 G193 H299 T303 I307
BS20 CLA A L202 A308 M311 L191 A297 M300
BS21 CLA A V307 M311 I318 G319 H320 V296 M300 I307 G308 H309
BS22 CLA A H329 H338 L341 L426 H318 H327 L330 L415
BS23 CLA A M197 L198 H201 M322 L345 T346 W349 Q352 N356 M186 L187 H190 M311 L334 T335 W338 Q341 N345
BS24 CLA A I365 H369 I402 I354 H358 I391
BS25 CLA A I366 H370 A373 M374 T506 W510 I355 H359 A362 M363 T495 W499
BS26 CLA A W87 S142 H393 W396 I397 I736 W740 W76 S131 H382 W385 I386 I725 W729
BS27 CLA A F360 Y377 L390 H393 H394 I397 F349 Y366 L379 H382 H383 I386
BS28 CLA A D58 L353 F400 G404 H408 I411 R572 W589 D47 L342 F389 G393 H397 I400 R561 W578
BS29 CLA A T334 R429 V430 H433 T323 R418 V419 H422
BS30 CLA A W443 F447 H451 W432 F436 H440
BS31 CLA A H491 A494 T498 W510 H480 A483 T487 W499
BS32 CLA A F278 T498 P500 N501 F267 T487 P489 N490
BS33 CLA A H369 A484 I487 H536 H539 K613 H358 A473 I476 H525 H528 K602
BS34 CLA A L448 P481 F483 A484 F533 H536 H537 L437 P470 F472 A473 F522 H525 H526
BS35 CLA A L441 I543 H544 L430 I532 H533
BS36 CLA A I700 A703 H704 V709 I689 A692 H693 V698
BS37 CLA A W50 F681 V726 H730 L733 W39 F670 V715 H719 L722
BS38 CLA A W443 I446 W432 I435
BS39 PQN A M684 F685 R690 W693 A717 L718 M673 F674 R679 W682 A706 L707
BS40 CLA A H329 R330 P332 H318 R319 P321
BS41 SF4 A C575 G577 C584 C564 G566 C573
BS42 CLA A L670 L673 G674 H676 F677 A680 L659 L662 G663 H665 F666 A669
BS43 CLA A T46 H704 P715 T35 H693 P704
BS44 CLA A F541 F597 W598 F530 F586 W587
BS45 CLA A E324 H329 E313 H318
BS46 CLA A F264 F265 F253 F254
BS47 CLA A H440 W443 H429 W432
BS48 CLA A F450 G454 I457 H458 M462 D470 F439 G443 I446 H447 M451 D459
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0005515 protein binding
GO:0009055 electron transfer activity
GO:0016168 chlorophyll binding
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding
GO:0051539 4 iron, 4 sulfur cluster binding
Biological Process
GO:0015979 photosynthesis
Cellular Component
GO:0009507 chloroplast
GO:0009522 photosystem I
GO:0009535 chloroplast thylakoid membrane
GO:0009579 thylakoid
GO:0016020 membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7d0j, PDBe:7d0j, PDBj:7d0j
PDBsum7d0j
PubMed33597543
UniProtP12154|PSAA_CHLRE Photosystem I P700 chlorophyll a apoprotein A1 (Gene Name=psaA)

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