Structure of PDB 7c1o Chain A

Receptor sequence
>7c1oA (length=301) Species: 224324 (Aquifex aeolicus VF5) [Search protein sequence]
MKVGYVAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTTRMRVLGVKNIPN
EAQIIFLDTPGIAEPKKSDVLGHSMVEIAKQSLEEADVILFMIDATEGWR
PRDEEIYQNFIKPLNKPVIVVINKIDKIGPAKNVLPLIDEIHKKHPELTE
IVPISALKGANLDELVKTILKYLPEGEPLFPEDMITDLPLRLLAAEIVRE
KAMMLTREEVPTSIAVKINEIKPGDANPNMLVIKGEIIVDRENLKPIIIG
KKGQRLKEIGKRARQELELILGRPVYLELWVKVVPDWRRRPEYVRLFGYA
L
3D structure
PDB7c1o Crystal structure of Aquifex aeolicus Era Y63A bound to GDP.AlF4-
ChainA
Resolution2.18 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ALF A P12 N13 K16 G36 T37 T38 G61 P12 N13 K16 G36 T37 T38 G61
BS02 GDP A N13 V14 G15 K16 S17 T18 I31 S32 P33 N123 K124 D126 S155 A156 L157 N13 V14 G15 K16 S17 T18 I31 S32 P33 N123 K124 D126 S155 A156 L157
BS03 MG A S17 T38 S17 T38
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003924 GTPase activity
GO:0005525 GTP binding
GO:0019843 rRNA binding
GO:0043024 ribosomal small subunit binding
GO:0070181 small ribosomal subunit rRNA binding
Biological Process
GO:0000028 ribosomal small subunit assembly
GO:0042254 ribosome biogenesis
GO:0042274 ribosomal small subunit biogenesis
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005886 plasma membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7c1o, PDBe:7c1o, PDBj:7c1o
PDBsum7c1o
PubMed
UniProtO67800|ERA_AQUAE GTPase Era (Gene Name=era)

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