Structure of PDB 7bmi Chain A

Receptor sequence

>7bmiA (length=429) Species: 9606 (Homo sapiens) [Search protein sequence]

KPKLLNKFDKTIKAELDAAEKLRKRGKIEEAVNAFKELVRKYPQSPRARY
GKAQCEDDLAEKRRSNEVLRGAIETYQEVASLPDVPADLLKLSLKRRSDR
QQFLGHMRGSLLTLQRLVQLFPNDTSLKNDLGVGYLLIGDNDNAKKVYEE
VLSVTPNDGFAKVHYGFILKAQNKIAESIPYLKEGIESGDPGTDDGRFYF
HLGDAMQRVGNKEAYKWYELGHKRGHFASVWQRSLYNVNGLKAQPWWTPK
ETGYTELVKSLERNWKLIRDEGLAVMDKAKGLFLPEDENLREKGDWSQFT
LWQQGRRNENACKGAPKTCTLLEKFPETTGCRRGQIKYSIMHPGTHVWPH
TGPTNCRLRMHLGLVIPKEGCKIRCANETKTWEEGKVLIFDDSFEHEVWQ
DASSFRLIFIVDVWHPELTPQQRRSLPAI

3D structure

PDB

7bmi Fluorinated derivatives of pyridine-2,4-dicarboxylate are potent inhibitors of human 2-oxoglutarate dependent oxygenases

Chain

Resolution

1.66 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

1.14.11.16: peptide-aspartate beta-dioxygenase.

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	peptide	A	A389 R393 S394 N395 F432 L433 L465 H493 F496 R526 F529 H530 Y565 E617 Q627 Q632 K666 T680 P682 R686 R688 I758	A60 R64 S65 N66 F103 L104 L136 H164 F167 R197 F200 H201 Y236 E288 Q298 Q303 K337 T351 P353 R357 R359 I429
BS02	MN	A	H679 H725	H350 H396
BS03	U4B	A	W625 S668 M670 H679 R688 H690 F719 H725 V727 R735	W296 S339 M341 H350 R359 H361 F390 H396 V398 R406

Gene Ontology

	Molecular Function
GO:0062101	peptidyl-aspartic acid 3-dioxygenase activity

	Biological Process
GO:0018193	peptidyl-amino acid modification
GO:0042264	peptidyl-aspartic acid hydroxylation

View graph for
Molecular Function

View graph for
Biological Process

External links

PDB	RCSB:7bmi, PDBe:7bmi, PDBj:7bmi
PDBsum	7bmi
PubMed
UniProt	Q12797\|ASPH_HUMAN Aspartyl/asparaginyl beta-hydroxylase (Gene Name=ASPH)

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