Structure of PDB 7ajz Chain A

Receptor sequence
>7ajzA (length=484) Species: 666 (Vibrio cholerae) [Search protein sequence]
WIDSTSPVNEQITNPALVEQIYHSNNDQLLWSDLATANHFEAQLEVIHRA
SFSPLFSRQLFALKSYRQQDRWHEYDVLATDTLLQYLSYAEQAPKVGIAW
FFEGQLDQPLAPPSEEAQLALHMAIGNQSLARLMDEYTPQDPAYQQLLQA
YQSLSSIEFNEVALYEQMERLKRPGDPLSHREALVQRLALVNLDTTSILN
DVAYYDASLEKPIKQFQKMHGLQTDGVIGPQTMKWLNTSVTERLALLALN
AERIRLWPTQQDSMIVVNVPGFDMKYWDAGREVFESKVVVGKTTRPTPVM
NTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLANHHMEIIRGWSDPE
VIDPALIDWEAVEPETFPYRLRQQAGVQNALGTYKFNTPNSRAIYLHDTP
SKHLFNNASRAFSSGCIRVENAEKFAQTLLANQGITLDDFPVSTQAIALK
KRIPVHIIYQTVWYEEGVLHYRDDIYHYDALALG
3D structure
PDB7ajz The X-ray Structure of L,D-transpeptidase LdtA from Vibrio cholerae in complex with NAG-NAM(tetrapeptide)
ChainA
Resolution2.98 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A L199 Q251 D253 G257 P258 Q259 T260 L171 Q223 D225 G229 P230 Q231 T232
Gene Ontology
Molecular Function
GO:0003674 molecular_function
GO:0004180 carboxypeptidase activity
GO:0016740 transferase activity
Biological Process
GO:0000270 peptidoglycan metabolic process
GO:0008150 biological_process
GO:0008360 regulation of cell shape
GO:0009252 peptidoglycan biosynthetic process
GO:0071555 cell wall organization
Cellular Component
GO:0005575 cellular_component

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7ajz, PDBe:7ajz, PDBj:7ajz
PDBsum7ajz
PubMed
UniProtQ9KSI8

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