Structure of PDB 6znp Chain A

Receptor sequence
>6znpA (length=748) Species: 224308 (Bacillus subtilis subsp. subtilis str. 168) [Search protein sequence]
KKKSLTELISDLKGNENVVNWHEIEPREAKTRPMPESIDERIKAALSKRG
IDELYTHQYSAFQYVQKGESIVTVTPTASGKTLCYNLPVLQSIAQDETNR
ALYLFPTKALAQDQKSELNEIIDEMGIDIKSFTYDGDTSPAIRQKVRKAG
HIVITNPDMLHSAILPHHTKWVSLFENLKYIVIDELHTYRGVFGSHVANV
IRRLKRICRFYGSDPVFICTSATIANPKELGEQLTGKPMRLVDDNGAPSG
RKHFVFYNPPIVNKPLNIRRSATAEVNELAKEFLKNKVQTIVFARSRVRV
EIILSHIQELVKKEIGTKSIRGYRGGYLPKERREIERGLREGDILGVVST
NALELGVDIGQLQVCVMTGYPGSVASAWQQAGRAGRRHGESLIIMVANST
PIDQYIVRHPEYFFNRSPESARINPENLIILVDHLKCAAYELPFRADEEF
GAMEVSDILEYLQEEAVLHRNGERYHWASESFPASNISLRSASQENVVIV
DQSDIANVRIIGEMDRFSAMTLLHDEAIYLHEGVQYQVEKLDWDHKKAYV
RKVDVEYYTDANLAVQLKVLEIDKTKEKSRTSLHYGDVTVNALPTIFKKI
KMTTFENIGSGPIHLPEEELHTSAAWLEIKTADEDIGEKTLEQLLLGISN
VLQHIVPVYIMCDRNDVHVVSQIKAAHTGLPTIFLYDHYPGGIGLAEEVF
KRFSDINEAAKQLITHCPCHDGCPSCIGTEIEGIKAKERILQLLDQMS
3D structure
PDB6znp A skipping rope translocation mechanism in a widespread family of DNA repair helicases.
ChainA
Resolution3.16 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.6.4.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna A T108 K109 Y135 D136 G137 R144 N157 D159 M160 H168 K171 S297 R298 R325 G326 R333 T351 N352 A353 F483 R491 S494 T107 K108 Y134 D135 G136 R143 N156 D158 M159 H167 K170 S296 R297 R324 G325 R332 T350 N351 A352 F482 R490 S493
BS02 ZN A C720 C724 C727 C719 C723 C726
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0004386 helicase activity
GO:0005524 ATP binding
GO:0016787 hydrolase activity
GO:0043138 3'-5' DNA helicase activity
Biological Process
GO:0006289 nucleotide-excision repair
GO:0032508 DNA duplex unwinding
GO:0036297 interstrand cross-link repair

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Molecular Function
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Biological Process
External links
PDB RCSB:6znp, PDBe:6znp, PDBj:6znp
PDBsum6znp
PubMed33300032
UniProtP50830|YPRA_BACSU Uncharacterized ATP-dependent helicase YprA (Gene Name=yprA)

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